prot_L-elsbetiae_contig5499.13764.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5499.13764.1
Unique Nameprot_L-elsbetiae_contig5499.13764.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length187
Homology
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BLAST of mRNA_L-elsbetiae_contig5499.13764.1 vs. uniprot
Match: A0A6H5JN11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN11_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 8.440e-18
Identity = 72/181 (39.78%), Postives = 91/181 (50.28%), Query Frame = 0 
Query:   17 MDDGTSEEMREKDEDVCALFATSMPRDIWANPSLAALAGLIDEDEDQKDESTSQAEQ----EDQAVPREDVSKAGGPCPANDTEKESLSCPA----AATDNQRTGTSDSGGTSGARHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPSSEFG---ARRRRTGPTTGETQVLMALWGL 186
            MD GT EE +EKDEDVCALFATSMPRD+WANPSLAALA +IDED ++K++     E     + Q  PRE     G    ++D  ++ L+       + T NQ      +  TSG+RHQ                              +G     G    R R + PTTGETQVLM+LW L
Sbjct:    1 MDHGTVEE-QEKDEDVCALFATSMPRDVWANPSLAALAAMIDEDAEEKEKQVDGQEHSSSNDHQGAPRE-----GSSSISDDGNEDGLAPRIQGAHSTTANQNGVRGGTTPTSGSRHQRREDMRRRRTERRASPYGPAAGRRV-----QGKHISSGRSVVRDRGSAPTTGETQVLMSLWRL 170
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5499.13764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN11_9PHAE8.440e-1839.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5499contigL-elsbetiae_contig5499:2786..5379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5499.13764.1mRNA_L-elsbetiae_contig5499.13764.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5499 829..5470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5499.13764.1 ID=prot_L-elsbetiae_contig5499.13764.1|Name=mRNA_L-elsbetiae_contig5499.13764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp
MDVGPTAGGPSSVVEKMDDGTSEEMREKDEDVCALFATSMPRDIWANPSL
AALAGLIDEDEDQKDESTSQAEQEDQAVPREDVSKAGGPCPANDTEKESL
SCPAAATDNQRTGTSDSGGTSGARHQRREDTRRRRHDRRAAPYGTAAGGG
GRRRRGEGPSSEFGARRRRTGPTTGETQVLMALWGL*
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