prot_L-elsbetiae_contig5496.13758.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5496.13758.1
Unique Nameprot_L-elsbetiae_contig5496.13758.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length276
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5496.13758.1 vs. uniprot
Match: D8LM84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM84_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 5.430e-94
Identity = 213/287 (74.22%), Postives = 227/287 (79.09%), Query Frame = 0 
Query:    1 MEDDSPIPFGEVVTLMLSQLRRKNIKFRRAAASSLAALLNAFPECCVYDLVGPTLLDLSGISARPPQAQVQPLTTGSXXXXXXXXXXAKVDPIMQARAVACLAAAWPRVPSPSSGASSXXXXXXXXXXXXXXXXXXX------------DAVRKLQRAHAASLTRALSGALSRVVWSVRVPIYGALSAVVSRTTTTTPESLSPVLTGSLLADVVQAVELGAEDAKYSQVRAAAISVVVAMTSRKELRLALTPHKEGLVGAARTAAEDPEPRVAVEGSKAAQNLSWWP 275
            MEDDSP PFG+VV LMLSQLRRK+ KF RAAASSLA LL+AFPECCVYDLV PTLL+L+G+              G+   XXXXXXX    PIMQARAVACLAAAWPRVP+       XXXXXXXXXXXXXXXXXXX            DAV  +QRAHAASLTR LSGA+   VWSVRVPIYGALSA+VSRTT    ES +PVLTGSLLADVV+AVELGAEDAKYSQVRAAAISVV AMT RKELRLALTPHKEGL GAARTAAEDPEP+VAVEGSKAAQNLSWWP
Sbjct: 2011 MEDDSPTPFGDVVALMLSQLRRKDTKFGRAAASSLAVLLDAFPECCVYDLVAPTLLELAGLD-------------GAAAGXXXXXXXXXXXPIMQARAVACLAAAWPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXARQADATTTRIDAVCNVQRAHAASLTRVLSGAILLKVWSVRVPIYGALSAIVSRTTAAA-ESRAPVLTGSLLADVVRAVELGAEDAKYSQVRAAAISVVGAMTCRKELRLALTPHKEGLAGAARTAAEDPEPKVAVEGSKAAQNLSWWP 2283
[Close]
BLAST of mRNA_L-elsbetiae_contig5496.13758.1 vs. uniprot
Match: A0A836CAR0_9STRA (Proteasome stabiliser-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 8.060e-11
Identity = 113/279 (40.50%), Postives = 136/279 (48.75%), Query Frame = 0 
Query:    7 IPFGEVVTLMLSQLRRKNIKFRRAAASSLAALLNAFPECCVYDLVGPTLLDLSGISARPPQAQVQPLTTGSXXXXXXXXXXAKVD--------PIMQARAVACLAAAWPRVPSPSSGASSXXXXXXXXXXXXXXXXXXXDAVRKLQRAHAASLTRALSGALSRVVWSVRVPIYGALSAVVSRTT-TTTPESLSPVLTGSLLADVVQAVEL--GAEDAKYSQVRAAAISVVVAMTSRKELR---LALTPHKEGLVGAARTAAEDPEPRVAVEGSKAAQNL 271
            I +GEVV L++ QL R++   RRAAASS+AAL  AFPEC  +    PTLL  + +                XXXXXXXXXX            P+MQARAV  L AAWPR      GA  XXXXXXXXXXXXXXXXX                    + AL   VWSVRV +   +  ++       T ++ +    G  L  V  AV    G  D KYS VR AA    +A+ S        L+L P KE L   AR AA D +  VA  G+KA Q L
Sbjct: 2202 IAYGEVVGLLVRQLGRQSKLVRRAAASSVAALAPAFPECDTFAAAAPTLLRAALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVMQARAVEALTAAWPR------GAGGXXXXXXXXXXXXXXXXX--------------------AAALPTRVWSVRVQLLRLIKTILEAGFGAATADAAAAASCGRALPAVAPAVASAGGIGDLKYSAVRVAAAEAALALASVSPAGPGGLSLVPFKEALQDVARVAAADGDASVASLGAKAQQAL 2454
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5496.13758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM84_ECTSI5.430e-9474.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAR0_9STRA8.060e-1140.50Proteasome stabiliser-domain-containing protein n=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 9..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5496contigL-elsbetiae_contig5496:7996..9645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5496.13758.1mRNA_L-elsbetiae_contig5496.13758.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5496 7281..9975 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5496.13758.1 ID=prot_L-elsbetiae_contig5496.13758.1|Name=mRNA_L-elsbetiae_contig5496.13758.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
MEDDSPIPFGEVVTLMLSQLRRKNIKFRRAAASSLAALLNAFPECCVYDL
VGPTLLDLSGISARPPQAQVQPLTTGSGGGGGGSGGGAKVDPIMQARAVA
CLAAAWPRVPSPSSGASSVSPAEAERDGAAVAAAAAADAVRKLQRAHAAS
LTRALSGALSRVVWSVRVPIYGALSAVVSRTTTTTPESLSPVLTGSLLAD
VVQAVELGAEDAKYSQVRAAAISVVVAMTSRKELRLALTPHKEGLVGAAR
TAAEDPEPRVAVEGSKAAQNLSWWP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold