prot_L-elsbetiae_contig5483.13746.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5483.13746.1
Unique Nameprot_L-elsbetiae_contig5483.13746.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length846
Homology
BLAST of mRNA_L-elsbetiae_contig5483.13746.1 vs. uniprot
Match: D8LIC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC9_ECTSI)

HSP 1 Score: 858 bits (2218), Expect = 1.020e-293
Identity = 594/866 (68.59%), Postives = 643/866 (74.25%), Query Frame = 0
Query:    1 LARSFSKPAEQL----ADRYTVEVRRPIDLTTVARRLRRGTYDNSAGRLKRDIVRIFTNCEKFNTGSVQLYVGIARHLRLLFESKWAEGGLPVPGESEPSSVRRRAALRSARYRLCWLSQLRGPLREAARRAVRAASAAALAAGGPGAADVSREFSEDILPMLSGDGEEAAEEWTLGLFAERACLALGLRANQPXXXXXXXXXXXXXXXXXXXXXXXXERAGRDACADWLFGPRQGAWLAAETAPAAEKADPASAPAAVATAAVVSAAWRALDAALSPATVPVASQASRGTQFSSVWARPDKLVWAKQAKNTYWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTRGNNRNGAVVELFGLHEFALLKPDALKPLSTLDDCPNKTVSKNKRWQPTMEEAQKALADLRHLDEAIYEAHPEPEQTADLAGFSMQGSGDEVSSQIQTLDSDTDTSSGESVLGSDTESASEFASXXXXXXXXXXXXXXXXXXXXXXXXXALTAAVEGTGAPSLATSYRNPSGGAGGPSTAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VGGIPAWRLALKRPREELTPKERALDKVSRYLDKFGDMFLRPAQRKALAEAREKEVRNELLFFIFVARGERGXXXXXXXXXX--VLGQTGLWGSLMGARGNTKAVEEETESTDGEDEDIGMIDSEGPNKRADRKSALRRQQQLLREDIENLEARAVLQEKRLGGLGAAIPPHAARQAKRDREWREFLDRRAPDSSRN--EPQRLAEEVGQK----------SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAYRSSSFRGVNLNGNRWLARITQ 846
            L+  F KP  QL    A+RYTVEVRRPIDLTTVARR+RRGTYDNSAGRL+RDI RIFTNCE+FN  S QL+VGIARHLR LFESKWAE  LP PGES+ +S RRRAALR+ARYRLCW +QLRGP                 AAGGPGA  VSREFSEDILPMLSG+GEE+ EEWTLGLFAERACLALGLRANQP XXXXXXXXXXXXXXXXXXXXXX E+AGRDACADWLFGPRQ AWLAAETAPA EK DPASAP  VATAAVVSAAWRALD ALSPATV VAS A+RGT FSSVWARPDKLVWAKQAKNT+WPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGT+GNNRNGAVVE FGLHEFALLKPDAL+PLSTLD  PNKTVSKNKRW PTMEEA+KA+ +LR L+ ++Y   P+PE  A L G +M+ S +E+  Q  T  SDTDTSSGES L SDTES ++ AS         XXXXXXXXXXXX    + TAAV G+ A S+   +R+  GG        XXXXXXXXXXXXX                       GG+ AWRLALKRP EELTPKERAL+KV RYLDKFGDMF   AQ KA AEAR+K+    L        G RG            VLGQTGLWGSLMGA      VEEETESTDGEDEDIGMIDSEGPNK ADRK+ALRRQQ++LR+DIENL+ARAVLQEKRL GLGAAIPPHAARQAKRDREWREFLDRR  DSS     P+  A E   K          ++XXXXXXXXXXXXXXXX                          XXXXXXXX SRAY SS+FRGVNLNGNRWLARI+Q
Sbjct:   12 LSEEFRKPVVQLHPELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGESQATSHRRRAALRTARYRLCWRAQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPXXXXXXXXXXXXXXXXXXXXXXGEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLDKSPNKTVSKNKRWDPTMEEARKAVVNLRDLETSMY--MPQPEPAAGLNGLTMEPSSEELH-QTGTPASDTDTSSGESTLESDTESNADLASPPTAECSSSXXXXXXXXXXXXP---SCTAAVAGS-ASSVGGPHRDSLGGXXXXXXXXXXXXXXXXXXXXXLLLSTGVSHFEGLNAAGGGKGRSGGLSAWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAML--------GGRGHNNAPSAPAAAAVLGQTGLWGSLMGAPAK---VEEETESTDGEDEDIGMIDSEGPNKCADRKAALRRQQEILRKDIENLQARAVLQEKRLNGLGAAIPPHAARQAKRDREWREFLDRRTSDSSAATASPRPSASEGSAKHPPASPAASGTAXXXXXXXXXXXXXXXXPSSANGGDSASSPGCSSLSRGSGDRGXXXXXXXXSSRAYGSSAFRGVNLNGNRWLARISQ 859          
BLAST of mRNA_L-elsbetiae_contig5483.13746.1 vs. uniprot
Match: A0A835ZC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC34_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.800e-33
Identity = 137/411 (33.33%), Postives = 188/411 (45.74%), Query Frame = 0
Query:    1 LARSFSKPAEQL----ADRYTVEVRRPIDLTTVARRLRRGTYDNSAGRLKRDIVRIFTNCEKFNTGSVQLYVGIARHLRLLFESKWAEGGLPVPGESEPSSVRRRAALRSARYRLCWLSQLRGPLREAARRAVRAASAAALAAGGPGAADVSREFSEDILPMLSGDGEEAAEEWTLGLFAERACLALGLRANQPXXXXXXXXXXXXXXXXXXXXXXXXERAGRDACADWLFGPRQGAWLAAETAPAAEKADPASAPAAVATAAVVSAAWRALDAALSPATVPVASQASRGTQFSSVWARPDKLVWAKQAKNTYWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQ--AKGTRGNNRNG---AVVELFGLHEFALLKPDAL--KPLSTLDDCPNKTVSKNKRWQPTMEEA 400
            LAR F +P ++L    A  Y   VRRP+DL+TVARRLRRG+Y + AG++ RDI RIF NCE+FN  S +LY+  ARHL+ L +  +AE GL + GE+   +  R  A R+ R+   W + L  P            +  A A                       DG       T+G     A  ALGL                        XXXXX  A   A A+W  G       A+  A   E                   AW  +  AL+  T  +A   +RGT+ SS+WARP  LVWAKQAKNT+WPAM+L  +     L  +N  R+P A    LE++  A+G   + ++     +VE  G HEF  L+ DA   +PLS     P++   K + ++  + EA
Sbjct: 2269 LARDFLRPVKELHPEIAIAYARAVRRPMDLSTVARRLRRGSYPD-AGKVYRDISRIFRNCERFNVDS-RLYINTARHLQALIDGLFAETGLALSGETAAETAARATASRARRFAAVWHAALLPPF----------TARVAAAXXXXXXXXXXXXXXXXXXXXXXQDGV------TVGAAVLHARAALGL----------------------PPXXXXXXHAQAAAEAEWAVG-------ASSVARDGE-------------------AWGDVVNALAQLTPELAEAVARGTEISSIWARPCALVWAKQAKNTFWPAMMLGRAAQGEQLTPINAARMPAAIFNMLEQRGPARGAPSSAQHADSHVIVEFLGTHEFGWLRDDAASARPLSDAAAAPHQKAPKKRAYEAALGEA 2613          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5483.13746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIC9_ECTSI1.020e-29368.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC34_9STRA1.800e-3333.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 693..720
NoneNo IPR availableGENE3D2.30.30.140coord: 290..415
e-value: 8.4E-9
score: 37.3
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 289..423
IPR000313PWWP domainPFAMPF00855PWWPcoord: 295..404
e-value: 1.4E-6
score: 28.6
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 4..66
e-value: 2.0E-7
score: 31.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..67
score: 11.436
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..86
e-value: 1.7E-12
score: 49.1
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 10..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5483contigL-elsbetiae_contig5483:171..10640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5483.13746.1mRNA_L-elsbetiae_contig5483.13746.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5483 171..10640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5483.13746.1 ID=prot_L-elsbetiae_contig5483.13746.1|Name=mRNA_L-elsbetiae_contig5483.13746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=846bp
LARSFSKPAEQLADRYTVEVRRPIDLTTVARRLRRGTYDNSAGRLKRDIV
RIFTNCEKFNTGSVQLYVGIARHLRLLFESKWAEGGLPVPGESEPSSVRR
RAALRSARYRLCWLSQLRGPLREAARRAVRAASAAALAAGGPGAADVSRE
FSEDILPMLSGDGEEAAEEWTLGLFAERACLALGLRANQPPPAEAAASVA
AVEDGSGGGGGGGGERAGRDACADWLFGPRQGAWLAAETAPAAEKADPAS
APAAVATAAVVSAAWRALDAALSPATVPVASQASRGTQFSSVWARPDKLV
WAKQAKNTYWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTRGN
NRNGAVVELFGLHEFALLKPDALKPLSTLDDCPNKTVSKNKRWQPTMEEA
QKALADLRHLDEAIYEAHPEPEQTADLAGFSMQGSGDEVSSQIQTLDSDT
DTSSGESVLGSDTESASEFASSSSFDPSSSSFSAAAAAASASSASHALTA
AVEGTGAPSLATSYRNPSGGAGGPSTAMSPPPPPSRASTGPGGGGGGGEA
GQQAGGGGGGGVGGIPAWRLALKRPREELTPKERALDKVSRYLDKFGDMF
LRPAQRKALAEAREKEVRNELLFFIFVARGERGAPSAPAAAAAVLGQTGL
WGSLMGARGNTKAVEEETESTDGEDEDIGMIDSEGPNKRADRKSALRRQQ
QLLREDIENLEARAVLQEKRLGGLGAAIPPHAARQAKRDREWREFLDRRA
PDSSRNEPQRLAEEVGQKSSAALAGGGGGLTATAATTARGSSSSPSSSSH
GTGDRGSGGGGGGGGGGLSSSSRAYRSSSFRGVNLNGNRWLARITQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom
IPR001487Bromodomain
IPR036427Bromodomain-like_sf