prot_L-elsbetiae_contig5469.13726.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5469.13726.1
Unique Nameprot_L-elsbetiae_contig5469.13726.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length223
Homology
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BLAST of mRNA_L-elsbetiae_contig5469.13726.1 vs. uniprot
Match: D7FHP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP0_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.490e-40
Identity = 105/227 (46.26%), Postives = 129/227 (56.83%), Query Frame = 0 
Query:    1 MISGPGIAATKFPRRGRPREIVLTLVLPAQGGGGVTRMDLSALGGASXXXXXXXXXXXXXXXXALQHPSASPSGRTAFGWLGGAATMARATSSLFEGTDCCRQSVGTSPTASSSLRSARALQHEPHRNGHQGGPRPLRAVLDLQLVWNRQRGGKGSLRVGEVVDALAGMDSQVLKPVCEEARKRAASRGGPQGEGAGGE----EDTFVSLLTSRRTLDLKFSTVPTR 223
            M+SGPGI ATKFPRRG+PR +VLTLV P                   XXXXX           ++   S   S  ++F    G       TSS         + + + P   S  RS R+  H+        GP  L+ VLDL+L WNRQRG KGSLR+GEV++A+AG+DSQ+L+PVCEE R+RAAS G  +  G GGE    EDTFVSL T+RRTLDLKFSTVP R
Sbjct:   28 MMSGPGIPATKFPRRGKPRSVVLTLVRPGGXXXXXXXXXXXXXXXXXXXXXXGVTSFSSTASPSMFGGSEEVSPASSFSSSVGRGRQRGITSSFGRTRFPAERDLFSKP---SYKRSFRSQPHQHXXXXXXQGPTSLKGVLDLELEWNRQRGRKGSLRLGEVIEAIAGIDSQILRPVCEELRRRAASVGESR-VGEGGEREEEEDTFVSLRTNRRTLDLKFSTVPIR 250
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BLAST of mRNA_L-elsbetiae_contig5469.13726.1 vs. uniprot
Match: A0A6H5KDH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH9_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.120e-12
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:  169 MDSQVLKPVCEEARKRAASRGGPQ-GEG-AGGEEDTFVSLLTSRRTLDLKFSTVPTR 223
            M  Q+L+PVCEE R+RAAS G  + GEG AG EEDTFVSL T+RRTLDLKFSTVP R
Sbjct:    1 MPCQILRPVCEELRRRAASVGESRAGEGGAGEEEDTFVSLRTNRRTLDLKFSTVPIR 57
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5469.13726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHP0_ECTSI2.490e-4046.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDH9_9PHAE1.120e-1271.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5469contigL-elsbetiae_contig5469:7129..11413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5469.13726.1mRNA_L-elsbetiae_contig5469.13726.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5469 7102..11413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5469.13726.1 ID=prot_L-elsbetiae_contig5469.13726.1|Name=mRNA_L-elsbetiae_contig5469.13726.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
MISGPGIAATKFPRRGRPREIVLTLVLPAQGGGGVTRMDLSALGGASAGG
VGGGGGDTAAAAAALQHPSASPSGRTAFGWLGGAATMARATSSLFEGTDC
CRQSVGTSPTASSSLRSARALQHEPHRNGHQGGPRPLRAVLDLQLVWNRQ
RGGKGSLRVGEVVDALAGMDSQVLKPVCEEARKRAASRGGPQGEGAGGEE
DTFVSLLTSRRTLDLKFSTVPTR
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