prot_L-elsbetiae_contig5464.13723.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5464.13723.1
Unique Nameprot_L-elsbetiae_contig5464.13723.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.300e-35
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0
Query:   85 QHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPP 147
            QHLCPITRCP+EDPAVAADGYTYER AIERWLSEHDTSPVTGK LETKVVFKNWSLVSS+P P
Sbjct:   42 QHLCPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSP 104          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: D7G3T4_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T4_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 8.790e-26
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 0
Query:   95 VEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPP 147
            +EDPAVAADGYTYER AIE WLSEHDTSPVTGK LETKVVFKNWSLVSS+P P
Sbjct:    1 MEDPAVAADGYTYERTAIECWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSP 53          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7S1UFM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.100e-18
Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 0
Query:   88 CPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPPQKRKGG 153
            CPIT  P+ +P VAADG+TYER+A+ERWL +HDTSP+TG+VL TK +F N +L ++ PP    K G
Sbjct:   37 CPITGAPMCEPVVAADGHTYERSAMERWLRDHDTSPLTGEVLPTKALFPNRTLAATNPPLAAAKAG 102          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7R9UF69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF69_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.010e-15
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0
Query:   88 CPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSL 140
            CPIT  P+ DP VAADG+TYER AI RW SEHDTSP+TG+VL TK +F N+++
Sbjct:   79 CPITGAPMCDPVVAADGHTYERTAILRWFSEHDTSPLTGEVLVTKALFPNFAI 131          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7S2FZS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZS1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.780e-13
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   87 LCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVS 142
            +CPIT+  + DP VAADG TYERAAIERWL+    SP TG+++ T+V+F N++L S
Sbjct:    8 VCPITQEAIVDPMVAADGVTYERAAIERWLATSRLSPATGQIMATRVLFPNYTLRS 63          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: UPI0004988E24 (U-box domain-containing protein 52-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0004988E24)

HSP 1 Score: 69.7 bits (169), Expect = 1.030e-12
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   83 PQQHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPPQKRK 151
            P   +CPI +  +++P VAADGYTY+R AIE+WL E+D SP+T   L  K V  N++L+S+    + RK
Sbjct:   28 PNHFICPILKDVMDEPCVAADGYTYDRKAIEKWLEENDNSPMTNLPLPNKDVILNYTLLSAIMEWKTRK 96          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A484EII3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EII3_BRELC)

HSP 1 Score: 74.3 bits (181), Expect = 1.410e-12
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0
Query:   83 PQQHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSL 140
            P+Q +CPIT CP+ DP VAADG++YER AI++WL+    SP+TG  + TK VF N++L
Sbjct:  444 PEQLICPITGCPMLDPVVAADGHSYERDAIQKWLTNSAISPMTGMHMSTKQVFSNFTL 501          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7S2EJ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EJ12_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.540e-12
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   88 CPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSS 143
            CPIT  P++DP VAADG+TYER AI RWL   D SP+TG+ L  K +  N+ L+SS
Sbjct:   37 CPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLSS 92          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7C9DRA3_OPUST (U-box domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DRA3_OPUST)

HSP 1 Score: 70.1 bits (170), Expect = 1.540e-12
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
Query:   83 PQQHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSS 143
            P   +CPI +  +EDP VAADGYTYER AIE+WL+++DTSP T   L  K +  N++L+ +
Sbjct:   56 PAHFICPILKDIMEDPYVAADGYTYERRAIEQWLTDNDTSPTTNLPLPHKFIMANYTLLEA 116          
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7S1BVM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVM2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.940e-12
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   83 PQQHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPPQKRK 151
            P    CPIT+ P+ +P VAADG+TYER AI RWL   D SP+TG+++  + +  N+ L+SS    +K +
Sbjct:   68 PGMPCCPITKTPMGNPVVAADGHTYERKAIARWLCSSDRSPLTGEMMAHRTLVPNYMLISSLTASKKNR 136          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDQ7_9PHAE1.300e-3592.06U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G3T4_ECTSI8.790e-2688.68Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S1UFM5_9STRA3.100e-1857.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UF69_9STRA1.010e-1566.04Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2FZS1_9STRA4.780e-1357.14Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
UPI0004988E241.030e-1246.38U-box domain-containing protein 52-like n=1 Tax=Ma... [more]
A0A484EII3_BRELC1.410e-1255.17Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S2EJ12_9STRA1.540e-1257.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7C9DRA3_OPUST1.540e-1250.82U-box domain-containing protein n=1 Tax=Opuntia st... [more]
A0A7S1BVM2_9STRA1.940e-1244.93Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 85..144
e-value: 8.1E-11
score: 51.9
IPR003613U box domainPFAMPF04564U-boxcoord: 83..140
e-value: 1.6E-9
score: 37.8
IPR003613U box domainPROSITEPS51698U_BOXcoord: 81..154
score: 16.906
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 78..140
e-value: 3.4E-21
score: 76.3
NoneNo IPR availablePANTHERPTHR46573FAMILY NOT NAMEDcoord: 26..140
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 82..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5464contigL-elsbetiae_contig5464:7830..9319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5464.13723.1mRNA_L-elsbetiae_contig5464.13723.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5464 588..10906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5464.13723.1 ID=prot_L-elsbetiae_contig5464.13723.1|Name=mRNA_L-elsbetiae_contig5464.13723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
MKGAVSGGTAAVASSTGSDHGGGGGGSGVGSAGSTTPVSAAAVVVASPEE
TERKTMTAAGLAAVPPSGLSRPQPPPPPQQQQPQQHLCPITRCPVEDPAV
AADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPPQKR
KGGVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD