prot_L-elsbetiae_contig5460.13719.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5460.13719.1
Unique Nameprot_L-elsbetiae_contig5460.13719.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
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BLAST of mRNA_L-elsbetiae_contig5460.13719.1 vs. uniprot
Match: D7G2I3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I3_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 9.190e-98
Identity = 144/155 (92.90%), Postives = 153/155 (98.71%), Query Frame = 0 
Query:    1 MDRSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKDSVTSRAMRRVKRPVHQKWTEALDWKKRTCLLTGESLSLFSDPKDTEPSQIVYLRGANAEPELGQAFKESAFRVETNKWKKGDELVDGTERRTFTFLAESKDEKELWLYQIRCGTKTCS 155
            +D+SQKQKAGTLSVMKYKVTMSQAATNARESTRRRK+SVTSRAM+RVKRPV QKWTEALDWKKR+CLLTGESLSLFSDPKDTEPSQIVYL+GA AEPELGQAFK+SAFRVETNKWKKGDE+VDGTERRTFTFLAESKD+KELWLYQIRCGTKTCS
Sbjct:   91 IDKSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIRCGTKTCS 245
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BLAST of mRNA_L-elsbetiae_contig5460.13719.1 vs. uniprot
Match: A0A6H5JJ45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ45_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 3.670e-81
Identity = 131/148 (88.51%), Postives = 142/148 (95.95%), Query Frame = 0 
Query:    1 MDRSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKDSVTSRAMRRVKRPVHQKWTEALDWKKRTCLLTGESLSLFSDPKDTEPSQIVYLRGANAEPELGQAFKESAFRVETNKWKKGDELVDGTERRTFTFLAESKDEKELWLYQIR 148
            +D+S K K GTLSVMK+KVTMSQAATNARESTRRRK+SVTSRAMR+VKRPV QKWTEA+DWKKR+C+LTGESLSLFSDPKDTEPSQIVYL GA AEPELGQAFKESAFRVETNKWKKGD+LVDGTERRTFTFLAESKD++ELWLYQIR
Sbjct:  393 IDKSHKHKEGTLSVMKHKVTMSQAATNARESTRRRKNSVTSRAMRKVKRPVQQKWTEAVDWKKRSCILTGESLSLFSDPKDTEPSQIVYLTGATAEPELGQAFKESAFRVETNKWKKGDDLVDGTERRTFTFLAESKDDRELWLYQIR 540
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5460.13719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2I3_ECTSI9.190e-9892.90PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JJ45_9PHAE3.670e-8188.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 6..154
e-value: 8.6E-8
score: 41.9
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 56..148
e-value: 7.6E-11
score: 42.5
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 49..152
score: 8.762
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 31..154
e-value: 4.9E-13
score: 50.6
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 60..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5460contigL-elsbetiae_contig5460:116..5934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5460.13719.1mRNA_L-elsbetiae_contig5460.13719.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5460 113..5934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5460.13719.1 ID=prot_L-elsbetiae_contig5460.13719.1|Name=mRNA_L-elsbetiae_contig5460.13719.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
MDRSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKDSVTSRAMRRVKRP
VHQKWTEALDWKKRTCLLTGESLSLFSDPKDTEPSQIVYLRGANAEPELG
QAFKESAFRVETNKWKKGDELVDGTERRTFTFLAESKDEKELWLYQIRCG
TKTCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf