prot_L-elsbetiae_contig546.13718.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig546.13718.1
Unique Nameprot_L-elsbetiae_contig546.13718.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
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BLAST of mRNA_L-elsbetiae_contig546.13718.1 vs. uniprot
Match: D8LQ07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ07_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 7.590e-7
Identity = 46/110 (41.82%), Postives = 54/110 (49.09%), Query Frame = 0 
Query:    1 MLHHICAEGATGDG-RSMRSALAYALAPLAALDLVVGPARPAVGSFSGDAGDTGNKEAGIRG---TVFVTQAEVEATIAGAGCRNGGINDAG-GDSPRFQREEDILRSGG 105
            +L  +C  G  G G   + SALAYALAPLA LDLVV P   A      D  D GN  AG+      VF  +       AGAG    G ND G G+ PR +R   +  SGG
Sbjct:  503 LLRRVCTSGRGGTGAEELCSALAYALAPLAVLDLVVCPRNLAADLRPTDTRDAGNAPAGVEADGDAVFERRVTTSREEAGAG----GYNDEGSGERPRSER---LAESGG 605
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BLAST of mRNA_L-elsbetiae_contig546.13718.1 vs. uniprot
Match: A0A6H5LQT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQT4_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 6.750e-6
Identity = 43/114 (37.72%), Postives = 54/114 (47.37%), Query Frame = 0 
Query:    1 MLHHICAEGATGDGRS-MRSALAYALAPLAALDLVVGPARPAVGSFSGDAGDTGNKEAGIRG---TVFVTQAEVEATIAGAGCRNGGINDAGGDSPRFQREEDI----LRSGGN 106
            +L  +CA G  G G   + SALAYALAPL  LDLVV P   A      D  D GN  AG+      V   Q       AGAG   G  ++  G+ PR +R+ +     L+  GN
Sbjct:  629 LLRRVCASGRGGTGEEELCSALAYALAPLTVLDLVVCPRNLAADLRPTDNRDAGNAPAGVEADGDAVIERQVTANREEAGAG---GDSDEGSGERPRSERQAEAGGLPLKENGN 739
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig546.13718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ07_ECTSI7.590e-741.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LQT4_9PHAE6.750e-637.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig546contigL-elsbetiae_contig546:16850..17185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig546.13718.1mRNA_L-elsbetiae_contig546.13718.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig546 16847..17185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig546.13718.1 ID=prot_L-elsbetiae_contig546.13718.1|Name=mRNA_L-elsbetiae_contig546.13718.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
MLHHICAEGATGDGRSMRSALAYALAPLAALDLVVGPARPAVGSFSGDAG
DTGNKEAGIRGTVFVTQAEVEATIAGAGCRNGGINDAGGDSPRFQREEDI
LRSGGNRRLQGG
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