prot_L-elsbetiae_contig546.13716.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig546.13716.1
Unique Nameprot_L-elsbetiae_contig546.13716.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
BLAST of mRNA_L-elsbetiae_contig546.13716.1 vs. uniprot
Match: D8LQ08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ08_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 4.890e-49
Identity = 107/197 (54.31%), Postives = 128/197 (64.97%), Query Frame = 0
Query:    1 EEACPYAACRPGILDSLLKYITPARKYSTFVFVLEGLVLILTCLLICYNPRDSTEDILIKTGSLVRNHDQLEAEGERRDEGGAGXXXGREGLKYVDVGGASGDRHPASATDGAFELDLLQPAAVAAARRAEAGLREGAGGYKPRGSAPPGLSPLAASNAPVDPLSQFMTPRFITGEEVMFAPGSPTGGDDESFEYHN 197
            EEACPYA CR GIL+ LL YITPARKYSTFVFVLEG+VLILTCLLICYNPRDSTEDILIKTG+++R H        +  EGG G    + G      GGA   ++PA A+  A  LDL+QPA   A RRA A  + GA G  P   A P +SP+A  N P +PLSQF+TP+   G  + + P S    D E++EY N
Sbjct:  211 EEACPYAPCRTGILEVLLSYITPARKYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTIMRQH-------HKPGEGGGGEPDSQVGDLEGAPGGA---KNPAGASIHALRLDLVQPAG--AVRRAGAAGKRGAAGGSPD-RATPAMSPMAVENIPTEPLSQFLTPKR-GGNRITYGPDSGGEDDGETYEYQN 393          
BLAST of mRNA_L-elsbetiae_contig546.13716.1 vs. uniprot
Match: A0A6H5JEQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ5_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.480e-20
Identity = 74/162 (45.68%), Postives = 91/162 (56.17%), Query Frame = 0
Query:   37 LVLILTCLLICYNPRDSTEDILIKTGSLVRNHDQLEAEGERRDEGGAGXXXGREGLKYVDVGGASGD-RHPASATDGAFELDLLQPAAVAAARRAEAGLREGAGGYKPRGSAPPGLSPLAASNAPVDPLSQFMTPRFITGEEVMFAPGSPTGGDDESFEYHN 197
            +VLILTCLLICYNPRDSTEDILIKTG++VR   Q    GER  E          G +  D+ G  G  ++PA A+  A  LDL+QPA   AARRA A  + GA G  P  S P  +SP+A  N        F+TPR   G  + + P S  G D E++ Y N
Sbjct:    1 MVLILTCLLICYNPRDSTEDILIKTGTIVR---QQHKPGERGGE--------EPGSQAGDLEGTPGGAKNPAGASIHALRLDLVQPAG--AARRAGAVGKRGAAGGSPDRSTP-AMSPMAVEN--------FLTPRR-GGNRITYGPDSDGGDDGETYAYQN 139          
BLAST of mRNA_L-elsbetiae_contig546.13716.1 vs. uniprot
Match: W7U843_9STRA (Tetraspanin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U843_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 9.800e-11
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    2 EACPYAACRPGILDSLLKYITPARKYSTFVFVLEGLVLILTCLLICYNPRDSTEDILIKTGSLV 65
            +ACPY  CR G+   L K +   +KY  F+ +L+ +VLI TC+LICYNPRDS  ++L KTG ++
Sbjct:  262 DACPYHRCRLGVARFLSKRLGALQKYLNFLLILQLIVLISTCMLICYNPRDSFAELLAKTGVVI 325          
BLAST of mRNA_L-elsbetiae_contig546.13716.1 vs. uniprot
Match: A0A812W7H9_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W7H9_SYMMI)

HSP 1 Score: 67.8 bits (164), Expect = 5.280e-10
Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    2 EACPYAACRPGILDSLLKYITPARKYSTFVFVLEGLVLILTCLLICYNPRDSTEDILIKTGSL 64
            + CPY  CR G+LD L+ Y+ P       + V +  +++LTC+LICY P+D+ E +L+KTG++
Sbjct:  204 DKCPYDQCRAGVLDYLISYMEPLNVALLVIAVFQLCIMVLTCMLICYTPQDTVEQMLVKTGTI 266          
BLAST of mRNA_L-elsbetiae_contig546.13716.1 vs. uniprot
Match: K0TPL8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPL8_THAOC)

HSP 1 Score: 62.8 bits (151), Expect = 2.960e-8
Identity = 31/64 (48.44%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    1 EEACPYAACRPGILDSLLKYITPARKYSTFVFVLEGLVLILTCLLICYNPRDSTEDILIKTGSL 64
            E ACPY  CR  I   L K++ PA+  +       GL+++L+ LLICYNPRDS E  L KTG L
Sbjct:  169 ESACPYDMCRLEIFHELSKFVGPAKVSAQASVAASGLMIVLSILLICYNPRDSIEIELYKTGVL 232          
BLAST of mRNA_L-elsbetiae_contig546.13716.1 vs. uniprot
Match: A0A7S2G7W8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7W8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.250e-8
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    4 CPYAACRPGILDSLLKYITPARKYSTFVFVLEGLVLILTCLLICYNPRDSTEDILIKTGSLV 65
            CPY  CR   +   L  + P  +Y  FV + E  ++ILTC LIC+NPRD+ + IL+K+G+  
Sbjct:  223 CPYDLCRRAAVTRFLGIVEPIGEYGIFVCIFETALMILTCCLICFNPRDAEQTILMKSGNFA 284          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig546.13716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LQ08_ECTSI4.890e-4954.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEQ5_9PHAE3.480e-2045.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U843_9STRA9.800e-1148.44Tetraspanin n=1 Tax=Nannochloropsis gaditana TaxID... [more]
A0A812W7H9_SYMMI5.280e-1041.27Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
K0TPL8_THAOC2.960e-848.44Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2G7W8_9STRA4.250e-841.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..206
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig546contigL-elsbetiae_contig546:6832..9338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig546.13716.1mRNA_L-elsbetiae_contig546.13716.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig546 6830..9338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig546.13716.1 ID=prot_L-elsbetiae_contig546.13716.1|Name=mRNA_L-elsbetiae_contig546.13716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
EEACPYAACRPGILDSLLKYITPARKYSTFVFVLEGLVLILTCLLICYNP
RDSTEDILIKTGSLVRNHDQLEAEGERRDEGGAGGGGGREGLKYVDVGGA
SGDRHPASATDGAFELDLLQPAAVAAARRAEAGLREGAGGYKPRGSAPPG
LSPLAASNAPVDPLSQFMTPRFITGEEVMFAPGSPTGGDDESFEYHNLLI
GTPPHT
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