Homology
BLAST of mRNA_L-elsbetiae_contig5453.13709.1 vs. uniprot
Match:
A0A6H5L1G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G3_9PHAE)
HSP 1 Score: 145 bits (367), Expect = 9.630e-41
Identity = 94/159 (59.12%), Postives = 107/159 (67.30%), Query Frame = 0
Query: 77 MNAMRRLIFVALALALTTCNAFYPSSATSFVRSAT--AASARHQATQTDHVPPSSSRAFSRAGAL-----GVSMTAEGPRSSRNVQRVAAVAXXXXXXXXXXSAVPAHAENFAQYFAQGIVGAINGPGILAVPIVLGFGLASAIAFFIYFFSQPREYDE 228
M A RL+ +ALA L+ C AF+ S TSF R AAS R ATQ+ HV P + RA+ GA G SM A P SS++ QRVAAVA SAVPAHA+NFA+YFA GIVG INGPGILA+PIVLG GLASAIAFFIYFFSQPREYD+
Sbjct: 2 MGATWRLVLLALAFVLSACTAFHVSP-TSFGRQPVGRAASLRPSATQSQHVAPFT-RAYRHTGASRTSTRGPSMAAGEPLSSKSAQRVAAVAAVASAATLTGSAVPAHADNFAEYFANGIVGTINGPGILAIPIVLGIGLASAIAFFIYFFSQPREYDD 158
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5453.13709.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
F V R T C S L G N A L L A W L K H N N G S C R P V V F L C L C A A Y C K P R Q K S A R D H S V F R N P I Q P L L S S G P P R S E Q A Q E R P V H C P V T M N A M R R L I F V A L A L A L T T C N A F Y P S S A T S F V R S A T A A S A R H Q A T Q T D H V P P S S S R A F S R A G A L G V S M T A E G P R S S R N V Q R V A A V A A A T S V A T L T S S A V P A H A E N F A Q Y F A Q G I V G A I N G P G I L A V P I V L G F G L A S A I A F F I Y F F S Q P R E Y D E * 20 40 60 80 100 120 140 160 180 200 220 Expect = 9.63e-41 / Id = 59.12 Sequence A0A6H5L1G3_9PHAE
Match Name E-value Identity Description
A0A6H5L1G3_9PHAE 9.630e-41 59.12 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
F V R T C S L G N A L L A W L K H N N G S C R P V V F L C L C A A Y C K P R Q K S A R D H S V F R N P I Q P L L S S G P P R S E Q A Q E R P V H C P V T M N A M R R L I F V A L A L A L T T C N A F Y P S S A T S F V R S A T A A S A R H Q A T Q T D H V P P S S S R A F S R A G A L G V S M T A E G P R S S R N V Q R V A A V A A A T S V A T L T S S A V P A H A E N F A Q Y F A Q G I V G A I N G P G I L A V P I V L G F G L A S A I A F F I Y F F S Q P R E Y D E * 20 40 60 80 100 120 140 160 180 200 220 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 79..99
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..78
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 100..156
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 157..178
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 221..228
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 198..220
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 179..197
None No IPR available TMHMM TMhelix coord: 198..220
None No IPR available TMHMM TMhelix coord: 83..100
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig5453.13709.1 ID=prot_L-elsbetiae_contig5453.13709.1|Name=mRNA_L-elsbetiae_contig5453.13709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp FVRTCSLGNALLAWLKHNNGSCRPVVFLCLCAAYCKPRQKSARDHSVFRN PIQPLLSSGPPRSEQAQERPVHCPVTMNAMRRLIFVALALALTTCNAFYP SSATSFVRSATAASARHQATQTDHVPPSSSRAFSRAGALGVSMTAEGPRS SRNVQRVAAVAAATSVATLTSSAVPAHAENFAQYFAQGIVGAINGPGILA VPIVLGFGLASAIAFFIYFFSQPREYDE* back to top