prot_L-elsbetiae_contig545.13701.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig545.13701.1
Unique Nameprot_L-elsbetiae_contig545.13701.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length235
Homology
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BLAST of mRNA_L-elsbetiae_contig545.13701.1 vs. uniprot
Match: D7G2W8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W8_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.130e-43
Identity = 75/88 (85.23%), Postives = 82/88 (93.18%), Query Frame = 0 
Query:   67 WGWSRAETARLVRLQAVARGWLLRRRVCWIPAKELEAVLKDVDQRDKGLRRLVAYLWFFVLFFAILILESDVTFQHTVETGITHFINQ 154
            WGWSR+ET RLVRLQAV RGWLLRR+V WIPA++LEAVLKD+DQRDKGLRRLVAYL FF+LFF ILILESDVTFQH+VETGIT FINQ
Sbjct:    8 WGWSRSETERLVRLQAVVRGWLLRRKVNWIPARDLEAVLKDLDQRDKGLRRLVAYLVFFLLFFGILILESDVTFQHSVETGITKFINQ 95
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig545.13701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2W8_ECTSI1.130e-4385.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..117
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 73..102
score: 6.668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig545contigL-elsbetiae_contig545:20359..24801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig545.13701.1mRNA_L-elsbetiae_contig545.13701.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig545 20359..24803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig545.13701.1 ID=prot_L-elsbetiae_contig545.13701.1|Name=mRNA_L-elsbetiae_contig545.13701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp
AYIHETQSGLIQIHQVQEIREGRPRENERQQSDPTTHPQLFASMIRMWFA
SEQPAKTSVRRNGAFSWGWSRAETARLVRLQAVARGWLLRRRVCWIPAKE
LEAVLKDVDQRDKGLRRLVAYLWFFVLFFAILILESDVTFQHTVETGITH
FINQVTSGPNGDVRLSDVATREQFSAWALSLYLAMYDGTEVEDVCNTCVA
MRAPSGFVFFPEVPPSVWGTEVPLASSSAGGSGSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS