prot_L-elsbetiae_contig5444.13692.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5444.13692.1
Unique Nameprot_L-elsbetiae_contig5444.13692.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length238
Homology
BLAST of mRNA_L-elsbetiae_contig5444.13692.1 vs. uniprot
Match: D7G7U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U5_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.010e-28
Identity = 65/121 (53.72%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    4 GGPSRNHFVSQIRARGGWHKYDCLLGGVVLSSDDFDSAWNSSSPCVLVYIKTSLRITTPPVYSRPQHLQLHHSPSGRPQPG--------SPSGRTTSHGNTDECLHHHVAPLSPSGRTATP 116
            GG  +NHFV+Q+R RG WHKYDCL GG V S+D FD+ WNSSS C+L Y+KTSL + TPP+Y+R +  Q H+SPSGR QPG        SPSGR     N      H  +P S SGRT +P
Sbjct:   17 GGSRKNHFVTQLRVRGRWHKYDCLAGGAVTSTDTFDADWNSSSQCMLAYLKTSLCVATPPLYTRHEE-QHHNSPSGR-QPGHRHHADDSSPSGR-----NHQRPSQH--SPQSLSGRTTSP 128          
BLAST of mRNA_L-elsbetiae_contig5444.13692.1 vs. uniprot
Match: A0A6H5KDI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI5_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.600e-18
Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 ALGGGPSRNHFVSQIRARGGWHKYDCLLGGVVLSSDDFDSAWNSSSPCVLVYIKTSLRITTPPVYS 66
            ALGGGP+RNHFVSQ+  RG WHK DCL GG+V SSD F S W+ SS  +LVY+++S+ + TPP Y+
Sbjct:  116 ALGGGPNRNHFVSQVWIRGRWHKDDCLQGGIVTSSDAFGSGWHVSSVHMLVYLRSSICVATPPPYA 181          
BLAST of mRNA_L-elsbetiae_contig5444.13692.1 vs. uniprot
Match: D7FSJ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ9_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 5.250e-13
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    4 GGPSRNHFVSQIRARGGWHKYDCLLGGVVLSSDDFDSAWNSSS 46
            GG  +NHFV+Q+R RG WHKYDCL GG + SSD FD+ WNSSS
Sbjct:   17 GGSRKNHFVTQLRVRGRWHKYDCLAGGAITSSDTFDADWNSSS 59          
BLAST of mRNA_L-elsbetiae_contig5444.13692.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.730e-9
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    6 PSRNHFVSQIRARG---GWHKYDCLLGGVVLSSDDFDSAWNSSSPCVLVYIKTSLRITTPPVYSRPQHLQLHHSPSG-----RPQPGSPSGR 89
            P R  F S    RG    WHKYDCL GG+V SSD +DS W+ SS  +LVY+++++ + TPP Y+        + P       + +P SPSGR
Sbjct:  560 PDRIFFRSSCVFRGLCGRWHKYDCLQGGIVTSSDAYDSGWHVSSVHMLVYLRSAICVATPPPYAPSSAATRSNVPRNACRVVQSEPTSPSGR 651          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5444.13692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7U5_ECTSI2.010e-2853.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDI5_9PHAE3.600e-1860.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSJ9_ECTSI5.250e-1367.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPV6_9PHAE2.730e-941.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5444contigL-elsbetiae_contig5444:7245..7958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5444.13692.1mRNA_L-elsbetiae_contig5444.13692.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5444 7245..7960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5444.13692.1 ID=prot_L-elsbetiae_contig5444.13692.1|Name=mRNA_L-elsbetiae_contig5444.13692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
ALGGGPSRNHFVSQIRARGGWHKYDCLLGGVVLSSDDFDSAWNSSSPCVL
VYIKTSLRITTPPVYSRPQHLQLHHSPSGRPQPGSPSGRTTSHGNTDECL
HHHVAPLSPSGRTATPICHYHRQKTTNCHQRSSHHGCITNTSAETYHAWR
HKKTNVHQERKTKQNKEKQERSNNFLWFHRQTSNRLCPTKTNIKSKSVEL
LHRHSGCCVHEVRSHFPYGHCACPCLHRPPPADQSVRA
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