prot_L-elsbetiae_contig544.13682.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig544.13682.1
Unique Nameprot_L-elsbetiae_contig544.13682.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length408
Homology
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A6H5KZ42_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ42_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 5.560e-91
Identity = 270/441 (61.22%), Postives = 285/441 (64.63%), Query Frame = 0
Query:    1 MFDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGALPPGTTPAPIAAAGASPSGFRGAPAAA-----QAPPTPPPPTLHQHAPQQSYSPQQYSPYSAAQQPQPXXXXXXXXXXXQQQQAYTPPQQSYGAPSTQ----------STYSPQQXXPXXXXXXXXXPYGNVMPGSGGGYAPPPSYVQQGYAPPYGQAPPPPFSQQQPYTPQPYGQQNYANRGGXXXXXXXXXXXXXGPSGASGSXXXXXXXXXSRPPPSQAAGNYGNYPPSANVMPSPQSGPYGGIPFSSERGSPSGFGSLGMGGGGAA-------------ARPMPNSGRPGRGXXXXXXXXXXXXXXXXXSHM---RAAAXXXXXXXXXXXXXXXXXXXX---LLQPPMHRQALVPPHDNGNFRPQMR 407
            MFDKGSGSQALVQMA+VH AMSAH AADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEG+LPPG TPAP AA G    G+RGAPAA+     Q PPTPP  T H+H PQQSYS QQYSPYSAAQQPQ                 Y PP Q                  STYSPQ       XXXXXXPYGNV+P  GGG    PSY+QQGYAPPYGQ   PPFSQQ        GQ  Y++RGG       XXXXXX        XXXXXXXX SRP    A+ NY   P + NVMP PQSGPYG IPFSSER SP GFGS+GMGGG                AR +P SGRPG  XXXXXXXXXXXXXXXXX      RAAA         XXXXXXXXXXX   LLQ PMHRQ  + PHDNGN+R QMR
Sbjct:   75 MFDKGSGSQALVQMANVHSAMSAHEAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGSLPPGVTPAPTAAPGVGADGYRGAPAASASPVTQGPPTPPSSTSHRHTPQQSYSSQQYSPYSAAQQPQATP--------------YAPPAQXXXXXXXXXXXXXXXXXPSTYSPQHQQ---QXXXXXXPYGNVIPSGGGGSYTSPSYIQQGYAPPYGQTSTPPFSQQXXXXXX-XGQHGYSSRGGARGGSSDXXXXXX----XXXXXXXXXXXXYSRPXXXHASTNYYTSP-ANNVMPQPQSGPYGSIPFSSER-SPGGFGSMGMGGGXXXXXXXXXXXXXXXXARAIPYSGRPGXXXXXXXXXXXXXXXXXXXXXXXQGRAAAGRGPPLGSGXXXXXXXXXXXXSGLLQAPMHRQGPMFPHDNGNYRSQMR 491          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A7S2XYL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYL8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.480e-15
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 MFDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIG 64
            +FDKGSG QALVQ A    A  A  + D+Q+MY+ CN IRVGYSNL N+TVK N++RSWDF  G
Sbjct:   99 LFDKGSGFQALVQYASEEPAKLAFDSVDLQDMYTNCNTIRVGYSNLNNITVKQNSDRSWDFTTG 162          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A7S3UWL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL0_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 9.790e-14
Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIG 64
            FDKGSG QAL+Q   V  A  A  A DMQ+MY+ CN IRVG+SNL  +TVK NT+RSWDF  G
Sbjct:   70 FDKGSGYQALIQYDSVEAATQAFQAVDMQDMYTNCNTIRVGFSNLTEITVKNNTDRSWDFTTG 132          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: C5L0S5_PERM5 (Polypyrimidine tract binding protein, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L0S5_PERM5)

HSP 1 Score: 67.0 bits (162), Expect = 2.780e-8
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGALPPGTTPAPI 80
            F++G+  QALVQ+ADV  A  A    D Q +Y+GCN I+V YS+L  + VK N ERSWDF     L G +  G+   P+
Sbjct:  183 FNRGNAVQALVQLADVDTANVAKEQLDGQNIYAGCNTIKVQYSSLPQLEVKHNNERSWDFTNPSLLPGGMEAGSGLTPL 261          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A7J6SYV6_PEROL (Uncharacterized protein n=2 Tax=Perkinsus TaxID=28000 RepID=A0A7J6SYV6_PEROL)

HSP 1 Score: 66.2 bits (160), Expect = 3.440e-8
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGALPPGTTPAP 79
            F++G+  QALVQ+ADV  A  A    D Q +Y+GCN I+V YS+L  + +K N ERSWDF     L G++  G++  P
Sbjct:  187 FNRGNAVQALVQLADVETANIAKEQLDGQNIYAGCNTIKVQYSSLPQLEIKHNNERSWDFTNPNLLSGSVGGGSSLTP 264          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A7J6MLJ2_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MLJ2_PERCH)

HSP 1 Score: 66.6 bits (161), Expect = 3.490e-8
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGALPPGTTP 77
            F++G+  QALVQ+AD+  A  A    D Q +Y+GCN I+V YS+L  + VK N ERSWDF     + G  P   TP
Sbjct:  183 FNRGNAVQALVQLADLETANIAKAQLDGQNIYAGCNTIKVQYSSLPQLEVKQNNERSWDFTNPSLISGPGPSTLTP 258          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A0G4EIL1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EIL1_VITBC)

HSP 1 Score: 66.2 bits (160), Expect = 4.110e-8
Identity = 31/65 (47.69%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDF-NIGP 65
            F +GSG QA V+++D+  A +A    + Q +YSGCN ++V +S+L+N+TVKG   RSWDF  +GP
Sbjct:  190 FRRGSGEQAFVELSDLEQAKAAVAGLNGQNIYSGCNHLKVQFSSLENLTVKGANSRSWDFVEMGP 254          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A7J6LFE9_PEROL (Uncharacterized protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LFE9_PEROL)

HSP 1 Score: 66.2 bits (160), Expect = 4.680e-8
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGALPPGTTPAP 79
            F++G+  QALVQ+ADV  A  A    D Q +Y+GCN I+V YS+L  + +K N ERSWDF     L G++  G++  P
Sbjct:  187 FNRGNAVQALVQLADVETANIAKEQLDGQNIYAGCNTIKVQYSSLPQLEIKHNNERSWDFTNPNLLSGSVGGGSSLTP 264          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A0B7A9S1_9EUPU (RRM domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7A9S1_9EUPU)

HSP 1 Score: 56.2 bits (134), Expect = 1.250e-5
Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDF 61
            F K +  QAL+QM+D   A +A  + D Q +Y+GCN +++ YS L N++VK N ++S DF
Sbjct:   70 FTKNNTFQALIQMSDAISAAAAKTSLDGQNIYNGCNTLKIDYSKLSNLSVKYNNDKSRDF 129          
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Match: A0A7S0R2I0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R2I0_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 1.890e-5
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    2 FDKGSGSQALVQMADVHMAMSAHGAADMQEMYSG--CNLIRVGYSNLQNVTVKGNTERSWDF---NIGPPLEGALPP 73
            F+KG+G+Q LVQ  D+  A +A  A +   +Y G  C L + GYS   ++ VK N+ERSWD+   N+ P + G  PP
Sbjct:   27 FEKGNGTQVLVQYPDLQSAATAKLALEGHAIYDGGYCRL-KCGYSRHTDLNVKMNSERSWDYTGSNLQPQMMGPPPP 102          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig544.13682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KZ42_9PHAE5.560e-9161.22RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2XYL8_9STRA3.480e-1560.94Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3UWL0_HETAK9.790e-1461.90Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
C5L0S5_PERM52.780e-845.57Polypyrimidine tract binding protein, putative n=1... [more]
A0A7J6SYV6_PEROL3.440e-844.87Uncharacterized protein n=2 Tax=Perkinsus TaxID=28... [more]
A0A7J6MLJ2_PERCH3.490e-846.05Uncharacterized protein n=1 Tax=Perkinsus chesapea... [more]
A0A0G4EIL1_VITBC4.110e-847.69Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7J6LFE9_PEROL4.680e-844.87Uncharacterized protein n=5 Tax=Perkinsus olseni T... [more]
A0A0B7A9S1_9EUPU1.250e-543.33RRM domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A7S0R2I0_9CHLO1.890e-541.56Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..66
e-value: 4.5E-10
score: 41.5
NoneNo IPR availablePANTHERPTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDcoord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig544contigL-elsbetiae_contig544:1209..5146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig544.13682.1mRNA_L-elsbetiae_contig544.13682.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig544 290..6206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig544.13682.1 ID=prot_L-elsbetiae_contig544.13682.1|Name=mRNA_L-elsbetiae_contig544.13682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=408bp
MFDKGSGSQALVQMADVHMAMSAHGAADMQEMYSGCNLIRVGYSNLQNVT
VKGNTERSWDFNIGPPLEGALPPGTTPAPIAAAGASPSGFRGAPAAAQAP
PTPPPPTLHQHAPQQSYSPQQYSPYSAAQQPQPTPYAAPPQQQPQQQQAY
TPPQQSYGAPSTQSTYSPQQQQPQPPQPQPQPPYGNVMPGSGGGYAPPPS
YVQQGYAPPYGQAPPPPFSQQQPYTPQPYGQQNYANRGGGRGGGGGGGDD
NNGPSGASGSNGIGGGGNYSRPPPSQAAGNYGNYPPSANVMPSPQSGPYG
GIPFSSERGSPSGFGSLGMGGGGAAARPMPNSGRPGRGGGAGGPGAGGPG
GGGGGSHMRAAAGRGPPPGGGAGGGRGGGSGGLLQPPMHRQALVPPHDNG
NFRPQMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf