prot_L-elsbetiae_contig543.13667.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig543.13667.1
Unique Nameprot_L-elsbetiae_contig543.13667.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length538
Homology
BLAST of mRNA_L-elsbetiae_contig543.13667.1 vs. uniprot
Match: D8LDF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF1_ECTSI)

HSP 1 Score: 870 bits (2247), Expect = 1.420e-315
Identity = 432/539 (80.15%), Postives = 469/539 (87.01%), Query Frame = 0
Query:    1 MNIGTGPEANFRDGCLSLRAATLDKMKASQSPGFYGQVPNGLGRQPLSNFRTQPVVGWGHYTGGVNDKGRPVETLNGKGTPGPQYQLDKLTCGQQVQSRFRTAPTPVFGSSQRAPINEEGCVSPGPMTAAVNVNAQPPGPKYSMAGAPWRKERTVAEKSPGPGEYNVYGCLGEQKESTRTSFKGFGFGGSGVTREMTLPTRNVPGPGQYAWAEKDRPKQPGGKFGLAAQRPLSRKETRPAPGQYTIPSTMGNTPDSKFRTVVAPGFGTPPPID-QRPHSAAGRLGGGPGPGAYDVGRVDSLAVSKKPLSTDKSCLSFQIKPPSIARPNGHHERKLQELDPESLRRAVESTRKGCRVPNISFGVGPQRPVENPGKCPGPQAYDXXXXXXXVSACKSSPIRGVKFGTGPQRHNMIESGNSPGPNASYVIPSTMGAQ-SNSMFESVKASSFGNPPKKPSRETATNSHGPGPADYKPTFSNLPQTTHGLSFGGAAAYGKGGGARGAVKRSSTPGPGAYAIGSGLGAQTSSKYRSGTAPSFRSR 537
            MNIGTGPEA+FRDGCLSLRA+TLDK++ASQSPGF GQVPNGLGRQPLSNFRTQPVVGWGHYT G+NDKGRPVETLNGK TPGPQY+LDK+TCGQQVQSRF+TAPTPVFGSSQR P+N EGCVSPGPMTA VNV+AQPPGPKYSMAGAPWRK +T A KSPGPG+YNVYG LGEQKESTRTSFKGFGFGGSGV R+M LP+R VPGPG Y+W EKDRP QPGGKFG A QRP +R + RPAPGQY+IPST+G T DS+FRTVVAPGFGTPPPID QRPHSAAGRLGGGPGPGAYDVGRVDSLAV KKPLST+KSCLSFQIKPP+  +PN   ERK+QELDPESLRRA++STRKGCRVPN+SFGVGPQRPV+NPGKCPGPQAYD       VSACKSSP RGVKFGTGPQRHN  ES  SPGPNA Y IPST+GAQ +NSMFESVK SSFG PP + SR   T    PGP+DY PT SN+ QTTH LSFGGA    KGGGARG  +RSS+PGPGAY+IGSGLG QTSSKY S T PSFR+R
Sbjct:    1 MNIGTGPEADFRDGCLSLRASTLDKIRASQSPGFSGQVPNGLGRQPLSNFRTQPVVGWGHYTDGINDKGRPVETLNGKNTPGPQYELDKVTCGQQVQSRFKTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWRK-KTKAPKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGSGVARDMALPSRKVPGPGHYSWHEKDRPSQPGGKFGQAPQRPQTRGDLRPAPGQYSIPSTLGTTMDSRFRTVVAPGFGTPPPIDEQRPHSAAGRLGGGPGPGAYDVGRVDSLAVQKKPLSTEKSCLSFQIKPPTSVKPNVSRERKMQELDPESLRRAIKSTRKGCRVPNVSFGVGPQRPVDNPGKCPGPQAYDPENLRRAVSACKSSPTRGVKFGTGPQRHNTAESDKSPGPNAGYFIPSTLGAQQTNSMFESVKTSSFGPPPNRSSRRN-TPVVTPGPSDYNPTSSNMAQTTHALSFGGATPNSKGGGARGMPRRSSSPGPGAYSIGSGLGVQTSSKYPSSTGPSFRAR 537          
BLAST of mRNA_L-elsbetiae_contig543.13667.1 vs. uniprot
Match: A0A485KFJ8_9STRA (Aste57867_3477 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KFJ8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.560e-7
Identity = 65/239 (27.20%), Postives = 91/239 (38.08%), Query Frame = 0
Query:   89 KLTCGQQVQSRFRTAPTPVFGSSQRAPINEEGCVSPGPMTAAVNVNAQPPGPKYSMAGAPWRKERTVAEKSPGPGEYNVYGCLGEQKESTRTSFKGFGFGGS---GVTREMTLPTRNVPGPGQYA--WAEKDRPKQPGGKFGLAAQRPLSRKETRPAPGQYTIPSTMGNTPD--SKFRTVVAPGFGTPPPIDQRP--HSAAGRLGGGPGPGAYDVGRVDSLAVSKKPLSTDKSCLSFQI 318
            K +CG+QV SR RTAPTP+FG+S R                                     K+     KSPGPG Y V   +     ST  +       G    G T ++     N PGPG Y       + P  P    G    + L  +   P PG Y  P  + NT    S  +   A  F   P ++++P   S+   +G    PG Y+ G V   AV K+ +ST  +  ++  
Sbjct:   42 KSSCGEQVDSRKRTAPTPIFGTSSRP------------------------------------KDPGDGSKSPGPGAYQVPSAISRPVLSTMVTAPACSIAGREKFGSTSDLKSAA-NCPGPGDYTPHIVNPNEPIAPQFSLGKKWSKSLDGQSKVPGPGAYDTPENLLNTKTVLSTSKHATASSF---PKVNRKPLMESSTADVG----PGQYNTGNV---AVGKQVVSTVTNAAAYSF 233          
BLAST of mRNA_L-elsbetiae_contig543.13667.1 vs. uniprot
Match: A0A067CAG1_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CAG1_SAPPC)

HSP 1 Score: 57.4 bits (137), Expect = 2.130e-5
Identity = 54/176 (30.68%), Postives = 74/176 (42.05%), Query Frame = 0
Query:   85 YQLDKLTCGQQVQSRFRTAPTPVFGSSQRAPINEEGCVSPGPMTAAVNVNAQPP-------GPKYSMAGAPWRKERTVAE-----KSPGPGEYNVYGCLGEQKESTRTSFKGFGFGGSGVTREMTLP---TRNVPGPGQYAWAEKDRPKQ--------PGGKFGLAAQRPLSRKET 237
            Y   K +CG QV SR RTAPT  FGSS RA  + +G  SPGP    V  +   P        P  S+AG    K  +V++       PGPG+Y+    +   KE+    +         + ++ T P   T+  PGPG Y   E    K         P   F    ++PL+   T
Sbjct:   33 YDDIKSSCGDQVDSRKRTAPTTCFGSSSRAQGHSDGSKSPGPGAYQVPTSLGKPVLSTMRTAPACSVAGR--EKFGSVSDLKSAASCPGPGDYSSQ--VVNLKEANAPHYS--------LGKKWTTPAEPTKKSPGPGAYDTPESISSKAVRSTNRSAPASSFSKVNRKPLTESST 196          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig543.13667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDF1_ECTSI1.420e-31580.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485KFJ8_9STRA1.560e-727.20Aste57867_3477 protein n=1 Tax=Aphanomyces stellat... [more]
A0A067CAG1_SAPPC2.130e-530.68Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010736Sperm-tail PG-rich repeatPFAMPF07004SHIPPO-rptcoord: 375..404
e-value: 0.43
score: 11.6
coord: 463..488
e-value: 1.7
score: 9.7
coord: 286..303
e-value: 1.1
score: 10.3
coord: 506..536
e-value: 1.1
score: 10.3
NoneNo IPR availablePANTHERPTHR21580SHIPPO-1-RELATEDcoord: 191..292
NoneNo IPR availablePANTHERPTHR21580SHIPPO-1-RELATEDcoord: 66..168
coord: 286..518
NoneNo IPR availablePANTHERPTHR21580:SF28SPERM-TAIL PG-RICH REPEAT-CONTAINING PROTEIN 2coord: 286..518
NoneNo IPR availablePANTHERPTHR21580:SF28SPERM-TAIL PG-RICH REPEAT-CONTAINING PROTEIN 2coord: 191..292
coord: 66..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig543contigL-elsbetiae_contig543:16233..27021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig543.13667.1mRNA_L-elsbetiae_contig543.13667.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig543 16233..27268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig543.13667.1 ID=prot_L-elsbetiae_contig543.13667.1|Name=mRNA_L-elsbetiae_contig543.13667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=538bp
MNIGTGPEANFRDGCLSLRAATLDKMKASQSPGFYGQVPNGLGRQPLSNF
RTQPVVGWGHYTGGVNDKGRPVETLNGKGTPGPQYQLDKLTCGQQVQSRF
RTAPTPVFGSSQRAPINEEGCVSPGPMTAAVNVNAQPPGPKYSMAGAPWR
KERTVAEKSPGPGEYNVYGCLGEQKESTRTSFKGFGFGGSGVTREMTLPT
RNVPGPGQYAWAEKDRPKQPGGKFGLAAQRPLSRKETRPAPGQYTIPSTM
GNTPDSKFRTVVAPGFGTPPPIDQRPHSAAGRLGGGPGPGAYDVGRVDSL
AVSKKPLSTDKSCLSFQIKPPSIARPNGHHERKLQELDPESLRRAVESTR
KGCRVPNISFGVGPQRPVENPGKCPGPQAYDPESLRRAVSACKSSPIRGV
KFGTGPQRHNMIESGNSPGPNASYVIPSTMGAQSNSMFESVKASSFGNPP
KKPSRETATNSHGPGPADYKPTFSNLPQTTHGLSFGGAAAYGKGGGARGA
VKRSSTPGPGAYAIGSGLGAQTSSKYRSGTAPSFRSR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt