prot_L-elsbetiae_contig5422.13658.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5422.13658.1
Unique Nameprot_L-elsbetiae_contig5422.13658.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length180
Homology
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 1.850e-90
Identity = 142/178 (79.78%), Postives = 152/178 (85.39%), Query Frame = 0
Query:    7 QVGLVNGIRGVVV-----DDAPPPKLPLYVVVKFRGYSGGEWSAQERYRGCVPISPVDTTWEDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAVTGNQ 179
            QVGLVNGIRG VV     DDAPPPKLPLYVVVKF GYSGGEWS+QERYR CVPISPVDTTW+DGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV GNQ
Sbjct:  118 QVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAVAGNQ 290          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 3.670e-88
Identity = 142/178 (79.78%), Postives = 152/178 (85.39%), Query Frame = 0
Query:    7 QVGLVNGIRGVVV-----DDAPPPKLPLYVVVKFRGYSGGEWSAQERYRGCVPISPVDTTWEDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAVTGNQ 179
            QVGLVNGIRG VV     DDAPPPKLPLYVVVKF GYSGGEWS+QERYR CVPISPVDTTW+DGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV GNQ
Sbjct:  292 QVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAVAGNQ 464          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 3.170e-85
Identity = 139/174 (79.89%), Postives = 149/174 (85.63%), Query Frame = 0
Query:    7 QVGLVNGIRGVVV-----DDAPPPKLPLYVVVKFRGYSGGEWSAQERYRGCVPISPVDTTWEDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAV 175
            QVGLVNGIRG VV     DDAPPPKLPLYVVVKF GYSGGEWS+QERYR CVPISPVDTTW+DGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV
Sbjct:    9 QVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAV 177          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 2.650e-73
Identity = 129/171 (75.44%), Postives = 136/171 (79.53%), Query Frame = 0
Query:    7 QVGLVNGIRGVVV-----DDAPPPKLPLYVVVKFRGYSGGEWSAQERYRGCVPISPVDTTWEDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVF 172
            QVGLVNGIRG VV     DDAPPPKLPLYVVVKF GYSGGEWS+QERYR CVPISPVDTTW+DGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEE      S A  R   ++   G F
Sbjct: 1423 QVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEA-----SDALDRQNAIFDESGHF 1586          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.070e-51
Identity = 91/117 (77.78%), Postives = 99/117 (84.62%), Query Frame = 0
Query:   63 EDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAVTGNQ 179
            EDGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV GNQ
Sbjct:    8 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAVAGNQ 119          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 4.940e-50
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0
Query:   62 WEDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAVTGNQ 179
            W+DGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDLIVE MSFD+IGNLGNS+TM     LQEEVRL +++  +TRVR  YT MGVF AV G  
Sbjct:    2 WQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGR--LQEEVRLGELAR-TTRVR--YTDMGVFGAVAGKS 114          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.080e-48
Identity = 88/115 (76.52%), Postives = 97/115 (84.35%), Query Frame = 0
Query:   63 EDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAVTG 177
            +DGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV G
Sbjct:   72 KDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAVAG 181          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 4.050e-48
Identity = 88/113 (77.88%), Postives = 96/113 (84.96%), Query Frame = 0
Query:   63 EDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAV 175
            EDGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAV 113          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 7.660e-48
Identity = 89/117 (76.07%), Postives = 98/117 (83.76%), Query Frame = 0
Query:   63 EDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAVTGNQ 179
            EDGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV G +
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAVAGRK 117          
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.340e-44
Identity = 88/114 (77.19%), Postives = 96/114 (84.21%), Query Frame = 0
Query:   64 DGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGPKGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEVRLQKVSTASTRVRCLYTGMGVFNAVTG 177
            DGG QVRTQLPLRLCWAITMHKSQGQTL KAVID+GPK  CTG TFVCLSRAKRLVDL+VE MSFD+IGNLGNS TM A   LQEEVRL +++  STRV+  YT MGVF+AV G
Sbjct:  350 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKAR--LQEEVRLGELAQ-STRVK--YTDMGVFSAVAG 458          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5422.13658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUS2_9PHAE1.850e-9079.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG8_9PHAE3.670e-8879.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4U7_9PHAE3.170e-8579.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L976_9PHAE2.650e-7375.44ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6H5KSF1_9PHAE1.070e-5177.78Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K214_9PHAE4.940e-5075.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH2_9PHAE2.080e-4876.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP5_9PHAE4.050e-4877.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN08_9PHAE7.660e-4876.07Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J8Y8_9PHAE2.340e-4477.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 8..142
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 8..142
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5422contigL-elsbetiae_contig5422:9211..9750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5422.13658.1mRNA_L-elsbetiae_contig5422.13658.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5422 9150..9969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5422.13658.1 ID=prot_L-elsbetiae_contig5422.13658.1|Name=mRNA_L-elsbetiae_contig5422.13658.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp
MNPGSVQVGLVNGIRGVVVDDAPPPKLPLYVVVKFRGYSGGEWSAQERYR
GCVPISPVDTTWEDGGMQVRTQLPLRLCWAITMHKSQGQTLEKAVIDVGP
KGTCTGHTFVCLSRAKRLVDLIVEAMSFDKIGNLGNSATMSAMYWLQEEV
RLQKVSTASTRVRCLYTGMGVFNAVTGNQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase