prot_L-elsbetiae_contig5421.13655.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5421.13655.1
Unique Nameprot_L-elsbetiae_contig5421.13655.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length273
Homology
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: D8LRE2_ECTSI (DEAD domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE2_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 1.780e-86
Identity = 159/289 (55.02%), Postives = 201/289 (69.55%), Query Frame = 0
Query:    6 LPPALSRSLELEEVEVTPLQASLWAEGSAGSDVLIEATSSPGTAITLAVLIIERLVDALEAAEAAIPLYLRKRKS-------LQRQKSATSFPSLTN-------------LFFGSASSTSSDK-RPTLQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAPVFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALVGVPALKRLDASGAVQESRVRMPTPLPSPSLSA 273
            LPPAL +SLE EEV+VTPLQAS+W+E  AG+D+LIEA S P T   LAVL+++RLV A+ +AEAA+P Y RKR S       L R  S+    + +N             L   + SS S    +P L ALVLTKNREVAA V + L R+GK  VP+L +A+L GGI V+ENA+TL  GCH+A+GTPGRVKFL+DKG+L     + LVLESADWL+APVF+EDV  +VR   EEKQV+ SSTV P+    E LC ++GVPALKRLD SGA++E++VRMP P PSP+ S+
Sbjct:    3 LPPALQKSLEAEEVQVTPLQASVWSEARAGADLLIEAKSGPETTTALAVLVLDRLVAAISSAEAALPRYARKRTSSFSGLSGLNRIVSSVLRTTSSNNNGNSNVKDGESDLSTANGSSGSGGLLKPQLCALVLTKNREVAAGVKDTLLRLGKTSVPNLTIASLVGGIAVSENAQTLSAGCHVAIGTPGRVKFLIDKGVLVADTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRLDPSGAIEEAQVRMPEPPPSPTPSS 291          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A6H5KKW2_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW2_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 2.860e-47
Identity = 90/145 (62.07%), Postives = 112/145 (77.24%), Query Frame = 0
Query:  129 EALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAPVFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALVGVPALKRLDASGAVQESRVRMPTPLPSPSLSA 273
            E L R+GK  VP+L +A+L GGI VAENA+TL  GCH+A+GTPGRVKFL+DKG+L     + LVLESADWL+APVF+EDV  +VR   EEKQV+ SSTV P+    E LC ++GVPALKRLD SGA+ E++VRMP P PSP+ S+
Sbjct:    2 ETLLRLGKSSVPNLTIASLVGGIAVAENARTLSAGCHVAIGTPGRVKFLIDKGVLVPDTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRLDPSGAIGEAKVRMPEPPPSPTPSS 146          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A6H5L0J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J6_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 5.100e-23
Identity = 71/150 (47.33%), Postives = 87/150 (58.00%), Query Frame = 0
Query:    6 LPPALSRSLELEEVEVTPLQASLWAEGSAGSDVLIEATSSPGTAITLAVLIIERLVDALEAAEAAIPLYLRKRKSLQRQKSATSFPSLTNL--FFGSASSTSSDK--------------------------RPTLQALVLTKNREVAASV 127
            LPPAL +SLE+EEV+VTPLQAS+W+E  AG+D+LIEA S P T   LAVL+++RLV A+ +AEAA+P Y RKR         TSF SL+ L     S   T+S                            +P L ALVLTKNREVAA V
Sbjct:    3 LPPALQKSLEVEEVQVTPLQASVWSEARAGADLLIEAKSGPETTTALAVLVLDRLVAAISSAEAALPRYARKR--------TTSFSSLSGLNRIVSSVLRTTSGNNSNSNVKDSESDLSTANGSSGSGGLLKPQLCALVLTKNREVAAGV 144          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A6H5KMB9_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB9_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.460e-20
Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 0
Query:  131 LRRIGKGCVPDLAVATLTGGIPVAENAKTLQGG-CHIAVGTPGRVKFLLDKGLLSTKPA-KQLVLESADWLLAPVFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALV 241
            L R+G+G +P L+VATL GG+PV+EN K L GG C++ VGTPGRVKFL+ +G L    A + LVL+SADWL+APVF +DV  I R   ++KQV+A S   P A     L ALV
Sbjct:    2 LTRLGEG-IPSLSVATLIGGVPVSENHKALAGGGCNVVVGTPGRVKFLIKEGTLRVSAAARTLVLDSADWLMAPVFHDDVGWIARNFPKDKQVLAFSGADP-ATYKAGLTALV 112          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A1B6JQH4_9HEMI (RNA helicase (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JQH4_9HEMI)

HSP 1 Score: 88.6 bits (218), Expect = 3.690e-17
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 0
Query:  110 PTLQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAPVFLEDVRSIVRVLSEEKQVIASS 225
            P LQA++L   RE+A  + E +  IG+  +P L      GG P++ +    +G CHIAVG PGR+K LL+KG+L+T+  +  VL+ AD L+   F+ED+  I   L E KQV+A S
Sbjct:   91 PRLQAIILAPTREIAQQITEVITAIGQE-IPGLKACCFVGGYPLSLDTSKARG-CHIAVGAPGRMKHLLEKGILNTEHVRLFVLDEADKLMEKAFVEDINVIFSHLPESKQVLACS 204          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A6P7SEX3_OCTVU (RNA helicase n=6 Tax=Octopus TaxID=6643 RepID=A0A6P7SEX3_OCTVU)

HSP 1 Score: 90.9 bits (224), Expect = 6.950e-17
Identity = 54/120 (45.00%), Postives = 71/120 (59.17%), Query Frame = 0
Query:  110 PTLQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAPVFLEDVRSIVRVLSEEKQVIASSTVGP 229
            P +Q LVL   RE+A  + + +  IG  CV  L  AT  GG+ V ++   L+  CHIAVGTPGR+KFL++KG L TK  +  VL+ AD LL   F  D+  I  VL E KQ++A S   P
Sbjct:   94 PAIQVLVLAPTREIAFQIWQVITSIGS-CVTGLKCATFIGGLSVTDDKNNLKI-CHIAVGTPGRIKFLIEKGYLRTKSIRLFVLDEADQLLDEQFQADINWIYSVLPENKQMLALSATYP 211          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A8E0RSJ7_9TREM (RNA helicase n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RSJ7_9TREM)

HSP 1 Score: 90.5 bits (223), Expect = 1.010e-16
Identity = 65/157 (41.40%), Postives = 84/157 (53.50%), Query Frame = 0
Query:  108 KRPTLQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAP-------------VFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALVGVPALKRLDA 251
            +RP LQALVL   RE+A      L R+G   +P L      GG+P+A+N K LQ  CHIAVGTPGRV++L++ G +ST+  + LVL+ AD LLA               F  D+  I   LS EKQ+IA S       + E L   +  P L RL A
Sbjct: 1594 QRPALQALVLAPTREIALQSQNVLERLGAH-LPGLKCRLFVGGLPLADNLKHLQE-CHIAVGTPGRVRYLIETGYMSTEHIRHLVLDEADLLLAGGAEANVTGGSANNAFPADINYIWWSLSPEKQMIALSATYTDYLVEEHLQRYMNNPVLVRLAA 1748          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A2H1BUU4_FASHE (RNA helicase n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1BUU4_FASHE)

HSP 1 Score: 89.7 bits (221), Expect = 1.080e-16
Identity = 63/157 (40.13%), Postives = 84/157 (53.50%), Query Frame = 0
Query:  108 KRPTLQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAP-------------VFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALVGVPALKRLDA 251
            +RP LQALVL   RE+A      L R+G   +P L      GG+P+A+N K L G CHIAVGTPGR+++L++ G ++T+  + LVL+ AD LLA               F  D+  I   LS EKQ+IA S       + E L   +  P L RL A
Sbjct:  130 QRPALQALVLAPTREIALQSQNVLERLGTH-LPGLKCRLFVGGLPLADNLKHLPG-CHIAVGTPGRIRYLIETGYMTTENIRHLVLDEADLLLAGGAEADVTGGSANNAFPADINYIWWSLSPEKQMIALSATYTDYLVEEHLQRYMNDPVLVRLAA 284          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: V3ZND2_LOTGI (RNA helicase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZND2_LOTGI)

HSP 1 Score: 87.8 bits (216), Expect = 2.200e-16
Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = 0
Query:  112 LQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAPVFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALVGVPALKRLDAS 252
            LQ LVL   RE+A  + + ++ IG  C+P LA  T  GG+P+ E+ + L+  C IA+G+PGRVK L++ GL+ST   +  +L+ AD LL   F E +  I   L + KQ++A S   P   + + L A +  P   RL+ S
Sbjct:   94 LQVLVLAPTREIAVQIQDVIKNIG-ACLPRLACHTFIGGLPIKEDIQKLRR-CQIAIGSPGRVKHLIEHGLMSTDSIRIFILDEADKLLEDSFQEQINWIYSSLPDNKQILALSATYPEY-LAQHLTAYMRNPTFIRLNVS 231          
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Match: A0A504ZB09_FASGI (RNA helicase n=2 Tax=Fasciola TaxID=6191 RepID=A0A504ZB09_FASGI)

HSP 1 Score: 89.0 bits (219), Expect = 2.770e-16
Identity = 62/157 (39.49%), Postives = 84/157 (53.50%), Query Frame = 0
Query:  108 KRPTLQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGGIPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLLAP-------------VFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALVGVPALKRLDA 251
            +RP LQALVL   RE+A      L R+G   +P L      GG+P+A+N K L G CHIAVGTPGR+++L++ G ++T+  + LVL+ AD LLA               F  D+  I   LS EKQ+IA S       + E L   +  P + RL A
Sbjct:  128 QRPALQALVLAPTREIALQSQNVLERLGTH-LPGLKCRLFVGGLPLADNLKHLPG-CHIAVGTPGRIRYLIETGYMTTENIRHLVLDEADLLLAGGAEADVTGGSANNAFPADINYIWWSLSPEKQMIALSATYTDYLVEEHLQRYMNDPVMVRLAA 282          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5421.13655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRE2_ECTSI1.780e-8655.02DEAD domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5KKW2_9PHAE2.860e-4762.07DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L0J6_9PHAE5.100e-2347.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMB9_9PHAE1.460e-2053.98DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A1B6JQH4_9HEMI3.690e-1742.24RNA helicase (Fragment) n=1 Tax=Homalodisca litura... [more]
A0A6P7SEX3_OCTVU6.950e-1745.00RNA helicase n=6 Tax=Octopus TaxID=6643 RepID=A0A6... [more]
A0A8E0RSJ7_9TREM1.010e-1641.40RNA helicase n=1 Tax=Fasciolopsis buski TaxID=2784... [more]
A0A2H1BUU4_FASHE1.080e-1640.13RNA helicase n=1 Tax=Fasciola hepatica TaxID=6192 ... [more]
V3ZND2_LOTGI2.200e-1638.30RNA helicase n=1 Tax=Lottia gigantea TaxID=225164 ... [more]
A0A504ZB09_FASGI2.770e-1639.49RNA helicase n=2 Tax=Fasciola TaxID=6191 RepID=A0A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 109..226
NoneNo IPR availablePANTHERPTHR24031:SF627ATP-DEPENDENT RNA HELICASE DBPAcoord: 109..226
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 22..225
e-value: 1.2E-13
score: 51.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 29..245
score: 9.918
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5421contigL-elsbetiae_contig5421:1217..8922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5421.13655.1mRNA_L-elsbetiae_contig5421.13655.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5421 1211..8922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5421.13655.1 ID=prot_L-elsbetiae_contig5421.13655.1|Name=mRNA_L-elsbetiae_contig5421.13655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MASFRLPPALSRSLELEEVEVTPLQASLWAEGSAGSDVLIEATSSPGTAI
TLAVLIIERLVDALEAAEAAIPLYLRKRKSLQRQKSATSFPSLTNLFFGS
ASSTSSDKRPTLQALVLTKNREVAASVAEALRRIGKGCVPDLAVATLTGG
IPVAENAKTLQGGCHIAVGTPGRVKFLLDKGLLSTKPAKQLVLESADWLL
APVFLEDVRSIVRVLSEEKQVIASSTVGPTAEIVESLCALVGVPALKRLD
ASGAVQESRVRMPTPLPSPSLSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase