prot_L-elsbetiae_contig541.13641.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig541.13641.1
Unique Nameprot_L-elsbetiae_contig541.13641.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1200
Homology
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: D7FPZ9_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ9_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 2.910e-83
Identity = 185/333 (55.56%), Postives = 217/333 (65.17%), Query Frame = 0
Query:  875 MPCLVAEAGAKRPGVDAIWG-GAAASTVSGSPGDLASSTGRA--GGPETKDGML-PAAISRVLHEEVFRVLALRRRDLDIVAHVSPELLQPAVAKSFWMFEDAISTRASHARALSNMGRLLENRGNPDEALLCFREASRADTGSAEALCYQAGNLQRRGDLDGAAIFFEGALARDASLWSAWYGLGQVKGTQGKHADAVEAFSKWLEGLKNADGEGRSDRSVSAANKPAREEVGGGAGEGAAMAKGLVQLGDAYRKLGQDKQAQSAYERAVSVDEGCSEAHFQLGSLLQ-----APALRSFALAVKAAGVAAVSAAGSGASQGPGGEPFPSFL 1198
            MPCL+AE G+    VD     GA ++T SG+   + +S+GR   G   T  GML PA I+RVLHEEVFRVLAL RRDLDIVA VSPELLQ AV KSFWMFE+A+ T A+ + ALSNMGRLLE+RG+PDEALLCF+EAS AD                                RD S WSAW GLGQVKG Q K+A+AVEAFSKWL+G    +G G ++   + +  P  E+V G       MAKGLVQLG+A+ KLGQDKQA+SAYERAVS DE CSEAHFQLG+LLQ     A AL++FA AVKAA VAA     SGA +G   E F SFL
Sbjct:    1 MPCLMAEVGSV---VDVAGAEGAGSATASGTLAGVVASSGRRADGSSSTNYGMLLPAPIARVLHEEVFRVLALNRRDLDIVARVSPELLQSAVVKSFWMFEEAVFTAAARSHALSNMGRLLEDRGHPDEALLCFQEASTADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDESHWSAWCGLGQVKGAQAKYAEAVEAFSKWLQGGGGGEG-GAAENGNTGSGAPQAEKVAGAR----FMAKGLVQLGEAHVKLGQDKQARSAYERAVSADENCSEAHFQLGTLLQRCGQDAEALKAFASAVKAAAVAAARGPDSGAGEG-SKEAFSSFL 324          
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A482S8G9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8G9_9ARCH)

HSP 1 Score: 85.9 bits (211), Expect = 4.390e-14
Identity = 63/227 (27.75%), Postives = 113/227 (49.78%), Query Frame = 0
Query:   29 ITVNMAG-KPIGLSLYPRLMSILATTDD-LNPHLRSSGWLLKRMDELRKAEQASFNAEEDYFNLDSGSRKH----LPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARV-----CVPRVAAGTQ--AVLMTLPDCVRVAKGVFVDPTTLYFRDLIATMAADSAGAGGMWNSTRGRISLSAFLYLAMV 242
            + V + G +P   + YPR  S++A   D + P LR   WL+K ++++     A F  E++    +  S       L FP F  +      G+K ++  +C D++ +V  YR++  ++E+FARF++EFY   +L F+L +R+   +V  V      V     G Q  +  M+  + V +A+ VF   +   +RD I  +     G+      TR RI ++ +L+L++V
Sbjct:   97 VQVRIVGVEPFDYTAYPRFSSLIANRGDTVKPKLRPLSWLMKHVEDVY---DARFEHEKNEVEREDDSPAFDLILLIFPIFVVRKVGTNVGLKSLLDQMCWDILHSVNTYRRDYLELEIFARFLQEFYDHDDLLFYLYVRSVISKVLHVNFKNRWVKFDGPGRQPRSQWMSYREAVHIARIVFGSDSEDMYRDFILLITPQMIGSKTDTTDTR-RIDITEYLHLSVV 319          
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A812U9B1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812U9B1_9DINO)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-13
Identity = 64/220 (29.09%), Postives = 105/220 (47.73%), Query Frame = 0
Query:   41 SLYPRLMSILATTDDLNPHLRSSGWLLKRMDELRKAEQASFNAE-----EDYFNLDSG---SRKHLPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARVC-------VPRVAAGT----QAVLMTLPDCVRVAKGVFV---DPTTLYFRDLIAT--MAADSAGAGGMWNSTRGRISLSAF 236
            S+YP+  S+++  D++ P LR   WL++ ++E+     A   AE     E      +    SR    FP+F  + F  R+G+ +++   C DL+ NV   RKE  +VEVFARF+EE+Y   +L FFL +R+   +  R         + +   G     +A+ M+  +C  VA+ VF    DP    F  L+ +   A  +A +     ST G +    +
Sbjct:   96 SVYPKFYSLISLRDNIAPKLRPLSWLMRLIEEIYDNRYARDTAELREEAEGAAGATAAPPKSRGPSDFPSFVVEFFSKRYGLPQLIDQTCWDLLYNVHAARKEYLEVEVFARFLEEYYDPDDLLFFLYVRSVVQKELRFTFRSRWTELGKSVLGADKTPKAIFMSQRECQLVARVVFGAEGDPLYRTFMALVDSRLQAGPAAVSTRSGRSTGGELEARGY 315          
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A7S3HLQ1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLQ1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.400e-12
Identity = 57/213 (26.76%), Postives = 102/213 (47.89%), Query Frame = 0
Query:   43 YPRLMSILATTDD-LNPHLRSSGWLLKRMDELRKAEQASFNAEEDYFNLDSGSRKH----LPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARVCVPR--------VAAGTQAVLMTLPDCVRVAKGVFVDPTTLYFRDLIATMAADSAGAGGMWNSTRGRISLSAFLYLAMV 242
            YPR  +++A   D + P  R   W++K ++++       F+ E++    +  S       L FP F  +      G+K +V   C DL+ NV +YRK+  ++EVF RF++EFY   +L FFL +R+   +V  +            V+   +A+ ++  +   VA+ VF       FRD +  +     G       +R RI ++ +L+L++V
Sbjct:  108 YPRFTALIANNGDTVRPRQRPFTWVMKIVEDIF---DHRFSLEKNDIEREDESPSFDLMLLIFPVFVVRKIGTNVGLKTIVDQTCWDLLYNVNLYRKDYLELEVFGRFLQEFYDHDDLLFFLYVRSVLAKVLHISFKARWQKKFDGVSGQPKALWISYKEAAHVARIVFGSDNEGLFRDFMRLITPQMVGEKTASGDSR-RIDITEYLHLSVV 316          
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A7S2E248_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E248_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.500e-9
Identity = 48/163 (29.45%), Postives = 80/163 (49.08%), Query Frame = 0
Query:   91 DSGSRKHLPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARVCV-------PRVAAGTQAVLMTLP--DCVRVAKGVFVDPTTLYFRDLIATMAADSAGAG--GMWNSTRGRISLSAFLYLAMV 242
            ++  ++   FP F  +HF  RHG++ +V     DL+ +V   RK+R DVE+FARF++E Y   +L FF+ LR+   ++  +          R     Q   + L   +CV VA+ VF +     + D +  + +   G    G    TR RI ++   +LA+V
Sbjct:   21 ENSEKEASSFPIFVIEHFAKRHGLQSLVDQFSWDLLYSVDSMRKDRLDVEIFARFLQEAYDTDDLLFFMYLRSVIQKMLNISFRNRWNTDSRRGQDRQPAQLWLSYRECVTVARTVFGNEDDAMYSDFLTVIESQLVGKKRHGHQADTR-RIDVNQLFHLAVV 182          
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A2R5G9E0_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9E0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.840e-8
Identity = 38/124 (30.65%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   43 YPRLMSILATTDDLNPHLRSSGWLLKRMDEL---RKAEQASFNAEEDYFNLDSGSRKHLPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRA 163
            Y +  S++   D L P  RS  WL   ++++   R A ++ ++ EE              FP F   H   R+G+++++  V  D++ +V  +R+ R +VEVFARF+EE+Y +++L F+L +R+
Sbjct:  162 YSKFCSLIEMRDKLEPRPRSLKWLNGLINDVYDDRAAVKSKYDLEELRI-----------FPVFVMDHLGKRYGLRQIIDQVAWDMVLSVHTHRRHRIEVEVFARFLEEYYDREDLRFYLRVRS 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FPZ9_ECTSI2.910e-8355.56TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A482S8G9_9ARCH4.390e-1427.75Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A812U9B1_9DINO6.600e-1329.09Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S3HLQ1_9STRA4.400e-1226.76Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2E248_9STRA3.500e-929.45Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2R5G9E0_9STRA1.840e-830.65Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 429..466
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 969..1179
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 969..1179
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 981..1014
e-value: 0.0045
score: 26.2
coord: 1114..1147
e-value: 0.012
score: 24.9
coord: 1015..1048
e-value: 150.0
score: 4.7
coord: 1049..1082
e-value: 39.0
score: 9.8
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 1114..1145
e-value: 1.0E-4
score: 22.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1049..1082
score: 7.198
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1114..1147
score: 9.411
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 981..1014
score: 8.024
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 957..1176
e-value: 2.3E-27
score: 97.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 969..1077
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1050..1160
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1114..1147
score: 9.867
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 981..1082
score: 15.863

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig541contigL-elsbetiae_contig541:28203..36631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig541.13641.1mRNA_L-elsbetiae_contig541.13641.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig541 28203..36631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig541.13641.1 ID=prot_L-elsbetiae_contig541.13641.1|Name=mRNA_L-elsbetiae_contig541.13641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1200bp
MYYIQYREEGTGGTGREEGGVGGQHPDGITVNMAGKPIGLSLYPRLMSIL
ATTDDLNPHLRSSGWLLKRMDELRKAEQASFNAEEDYFNLDSGSRKHLPF
PAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFY
GQKELCFFLDLRAEAHRVARVCVPRVAAGTQAVLMTLPDCVRVAKGVFVD
PTTLYFRDLIATMAADSAGAGGMWNSTRGRISLSAFLYLAMVCFISPKEP
AETPSQQHLQQPSRPLEEAMSPADSGGRRLYVRDRSGGGGGAGNNPCVTT
TLSSPSTPGPRGWNAFRGSSEAAEAREGGTPSPASVVTPRVGRVMTTPNA
VPEKLPWGVLSLPQLSPRQALRPSSPCLSRSRSPRAGQPDNGSSSGERCL
LHPVDVQIERPKSPTLTSLQSPPTLRQGRHRQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQPQDQEQPQQREEKRSASPASPASPQPQPQPQPQP
QPQQQQTRNHNDDSSERPTTPTILEWGLNSLLSYVRGGEGSVGAEGVIRP
GKSNAQDAWSAFSPASSGLRRREEISPAPPPPPASTPARPASAVPENGRG
GRGAAEQKTEAQAAVPAVDSSGGDTIWGPLKQDTGGGRASSPSEAAIVRR
SMTGRSASFAAANGGRDGCYSGGGCADRGGSRGRATLASADGLKGEAPGA
QPQLQQQDSRATSPRRTKATPPLPASMIPGSSRPPGWPLRALGPLALLGR
IIRSRSPSRSRSRSTSPTSKNDLNGKRQRSINTEPTGQNGRREHEETGHS
NKVAVVAVRADRWSSASPPDEGSYGKKMQSEKYGTNSNDKGDTVAGHPHA
DGHEFGHDVASAANAWLVSFEQRFMPCLVAEAGAKRPGVDAIWGGAAAST
VSGSPGDLASSTGRAGGPETKDGMLPAAISRVLHEEVFRVLALRRRDLDI
VAHVSPELLQPAVAKSFWMFEDAISTRASHARALSNMGRLLENRGNPDEA
LLCFREASRADTGSAEALCYQAGNLQRRGDLDGAAIFFEGALARDASLWS
AWYGLGQVKGTQGKHADAVEAFSKWLEGLKNADGEGRSDRSVSAANKPAR
EEVGGGAGEGAAMAKGLVQLGDAYRKLGQDKQAQSAYERAVSVDEGCSEA
HFQLGSLLQAPALRSFALAVKAAGVAAVSAAGSGASQGPGGEPFPSFLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom