prot_L-elsbetiae_contig5409.13637.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5409.13637.1
Unique Nameprot_L-elsbetiae_contig5409.13637.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1229
Homology
BLAST of mRNA_L-elsbetiae_contig5409.13637.1 vs. uniprot
Match: D7FI04_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI04_ECTSI)

HSP 1 Score: 739 bits (1907), Expect = 2.710e-241
Identity = 463/766 (60.44%), Postives = 509/766 (66.45%), Query Frame = 0
Query:  485 LPMDPPPPILPPSATSDTSGLARASIDGVFDSCPAAGTDAKSD--SHRSLSVGTSPKFHTMPLSLAAKGITTAVADAWNGTRRASPRPRPPVSPGPAALSNS------FRSRARSAT-EPDDALSRTLPSGATAASGRNGAAAVAGSSPPRTASPRSLSAGSRRASP----RSGMATPRSPPFVPAIQLSPQGKLQASPHAPGPRPTETAAFYRGRLGELPPPAGAVRL-PPPSRTYLGRPEGFSLHVLVASAPTRADLAPEGGGLPVVAGGGKDNCPRLYYSFEDRGRVAAALQPGDVVLVTPGRYEARAWGLQRLVFSVEIVGAGVAGDCVIYNDPAASASDSGLAREHYLLGVMGGTLGSAGGDRASVPEVKGKDNA--DDDSDSGFEDGAFGAAASSITSLGRKAVRVRLANLTLEQGSGYRGAVYQLGRESHLEMEGCAVVCSQGGVNIDQGTCAICDSTISGSEAFGVHIGGEGAVEHCLIRDCGRGGRSRRHRGGNQQGAEALPXXXXXXXXXXXXEAEDD--------GTDVNRVEGMPAVSFLQSSRVRVRFSVIRDNAGHSLQCRDAPLPGGDGKYAMLARRAEAEAEEKLRSWLGSAAVLLREHLQGQHREGSIVSERNLCKLNRGCDRAGCGGNGRHRRGGTAE-----GGTTACLAAGEVSAGAGAGAVSXXGEERSVGXXXXXXSGETSGRQPPRGDRGSDKATETGATCVPTAEEEGLPLPAAMTLRFLAAMDEGYIGSRREENARLKRRR 1221
            LPM+PPPPI     TS  +G +  +  GVFDSCP +   + S+  S RSLSVGT P+F +MPL LAA+   +A   AW   RR SPRPRPPVSPGPAALS S      FR R  SA  E DD      P  A    G +G      S+PP + +  +LS+ +  ASP    RS   T R PPFVP I+LSP+  L ASPHAPGPR T+TA FYR R    P PAG + L PP S+ Y GRP GFS+HVLVASA + ADL   G        GG +N PRLYYSFEDRGRVA AL+PGDVVLVTPGRYEARAWGLQRLV SVEI+GAG AGDCV+YND  +S  D     EHYL+GVMGG LGSAG   ASVPEVKGKD    DDDSDSGFEDGA G A S + S   +AVRVRLANLTLEQGSGYRG VYQLGRESHLEM+GC V  S+GGVNIDQGTC ICDS ISGSE FGVHIGGEGAVEHC IR CGRGGR          G     XX           A D+        GTDVNRV  MPA+S LQSSRVRVRF+VIRDNAGH+LQ RDAPLPGGDGKYA+LARRAEAEAEEKLRSWLGSA+VLLREHLQGQHREGS+VSE N C LNRGCD A C G G     G A                E +AG G G       E  VG       GE   R  P G            TCVPTAEEEGLPLPAAMTLRFLAAMDEGY+GSRREENARLK+R+
Sbjct:  687 LPMEPPPPI----QTSSKTGASSLADTGVFDSCPPSTGASPSEPGSQRSLSVGTVPQFLSMPLVLAAREKASAAVAAWQKDRRNSPRPRPPVSPGPAALSQSSPLKSAFRFRKPSAAVEHDDEGPEITPPSAATLGGGSGRKL---SAPPLSRTFSALSSAASHASPGSASRSASRTTR-PPFVPTIELSPRASLPASPHAPGPRITDTAKFYRERANAAPAPAGDIGLLPPASKAYFGRPSGFSVHVLVASALSAADL---GDRQQQHLEGGGNNSPRLYYSFEDRGRVAEALRPGDVVLVTPGRYEARAWGLQRLVSSVEIIGAGDAGDCVLYNDRVSSGPDG----EHYLVGVMGGALGSAGAGGASVPEVKGKDVVADDDDSDSGFEDGALGPANSLVHSFSSRAVRVRLANLTLEQGSGYRGTVYQLGRESHLEMDGCTVAGSKGGVNIDQGTCIICDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGGR----------GXXXXXXXGKYLSSSTVCNAGDEXXXXXXXXGTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSASVLLREHLQGQHREGSVVSEGNQCHLNRGCDLARCSGGGAAEEIGAAARXXXXXXXXXXXXXAESTAGEGEGL------EPEVGGQEI---GEEVSRDGPGGGETRTGTLRGQQTCVPTAEEEGLPLPAAMTLRFLAAMDEGYVGSRREENARLKKRK 1418          
BLAST of mRNA_L-elsbetiae_contig5409.13637.1 vs. uniprot
Match: A0A6H5L4X5_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X5_9PHAE)

HSP 1 Score: 722 bits (1864), Expect = 5.310e-235
Identity = 595/1232 (48.30%), Postives = 682/1232 (55.36%), Query Frame = 0
Query:   51 SRVRRSSHAPENSTSLRGNLSPPXXXXNGESV----------RRESAPLYPVALEKSKRRAANQGTLSAVNASGRGPPPPYALVAHRAETVKQAIPPTTSVSXXXXXXXXXXXXXAAARSATKAAERVVAGVRPELPLLKWSSSAGGPPAVRVAPRLPPRTALSLGHTVSPPRGSP-SDERSAGTAAKSPQHTREKE---GEKLVGGYEPAAAKDADALANSPFEKEA-----LAGQMKAWVDGPQLSKQVEDGARLVGIRGEEDTD-----------EPTPERRVG--AQSQGMFDATHGVGVPSLAKDSTEGSAAGSTTGQEVNT--VRVRPSLSKDSSDNXXXXXXXXXXXXXXXXXSSDSAAGSTAGQEVNPAVGVRPFLSENXXXXXXXXXXXXXXXXXEGCTVPVRVSLDKDSAXXXXXXXXXXXXXXXXSGTATVQ--------PNPETSDSFSHGSAAASTAVQEEMRLPMDPPPPILPPSATSDTSGLARASIDGVFDSCPAAGTDAKSD--SHRSLSVGTSPKFHTMPLSLAAKGITTAVADAWNGTRRASPRPRPPVSPGPAALSNS--------FRSRARSATEPDDALSRTLPSGATAASGRNGAAAVAGSSPPRTASPRSLSAGSRRASPRSGMATPRS-PPFVPAIQLSPQGKLQASPHAPGPRPTETAAFYRGRLGELPPPAGAVRL-PPPSRTYLGRPEGFSLHVLVASAPTRADLAPEGGGLPVVAGGGKDNCPRLYYSFEDRGRVAAALQPGDVVLVTPGRYEARAWGLQRLVFSVEIVGAGVAGDCVIYNDPAASASDSGLAREHYLLGVMGGTLGSAGGDRASVPEVKGKDNA--DDDSDSGFEDGAFGAAASSITSLGRKAVRVRLANLTLEQGSGYRGAVYQLGRESHLEMEGCAVVCSQGGVNIDQGTCAICDSTISGSEAFGVHIGGEGAVEHCLIRDCGRGGRSRRHRGGNQQGAEALPXXXXXXXXXXXXEAEDDGTDVNRVEGMPAVSFLQSSRVRVRFSVIRDNAGHSLQCRDAPLPGGDGKYAMLARRAEAEAEEKLRSWLGSAAVLLREHLQGQHREGSIVSERNLCKLNRGCDRAGCGGNGRHRRGGTAEGGTTACLAAGEVS-----AGAGAGAVSXXGEERSVGXXXXXXSGETSGRQPPRGDRGSDKATETGATCVPTAEEEGLPLPAAMTLRFLAAMDEGYIGSRREENARLKRRR 1221
            SR RR +H         G+LSP       E V          RRESAPLYP ALEK+KR AA +    A + S RGP                         XXXXXXXXXXXXX A    T                             R+ P LPPR ++SL    + PRGS  S   + GT+  SPQ    +    G++  G +E  A K   A   S  E E        G  +  +D  +++K  E G   V   GEE              EPTPE R G  A+++    A   V  P +AKD ++ SAAGS   +E +   V V+P L+   +                   S D AAGS  G+E + A      L+++     XXXXXXXX    E   VP R +      XXXXXXXXXXX        A V                                                    SG+A     GVFDSCP +   + S+  S RSLSVGT P+F +MPL LAA+   +A   AW   RR SPRPRPPVSPGPAALS +        FR  + ++   D+   RTLPS A+A  G  G A    S+P  + +  +LS+ +  AS     A+P + PPFVP I+LSP+  L ASPHAPGPR T+TA FY  R G  P PAG V L PP S+ Y GRP GFS+HVLVASA + ADL   G        GG  + PRL YSFEDRGRVA AL+PGDVVL+TPGRYEARAWGLQRLV SVEI+GAG A DCV+YNDPA S    G A EHYL+GVMGG LGSA G  ASVPEVKGKD    +DDSDSGFEDGA G A S + S   +AVRVRLANLTLEQGSGYRGAVYQLGRESHLEM+GC VV S+GGVN+DQGTC I DS ISGSE FGVHIGGEGAVEHC IR CGRGG                 XXXXXXXXXXXX      TDVNRV  MPA+S LQSSRVRVRF+VIRDNAGH+LQ RDAPLPGGDGKYA+LARRAEAEAEEKLRSWLGSAAVLLR+HLQGQHREGS+VSE N C LNRGCD A C G G     G                     AG G G     G +           GE  G    R  RG         TCVPTAEEEGLPLP+AMTLRFLAAMDEGY+GSRREENARLK+RR
Sbjct:  265 SRARRRTHNLTKGGRAYGSLSPTPAPPAAEEVKRRRAGSGPIRRESAPLYPAALEKTKRLAARKDASLAADVSRRGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTANVRQT----------------------------TRIPPPLPPRPSVSLDANTAFPRGSSLSPGLAGGTSTGSPQQLAPENKAGGDQPAGEHESTAGKGVKAPRESQLENEKPQVSRFGGGGEGEIDALEVAKDGEGGGVQVAREGEEXXXXXXXXXXXXXXEPTPESRAGDDARARDTHGAPEWVVPPPVAKDRSQDSAAGSPRAREDDNEVVPVQPVLTTGPA----------------HEVSQDLAAGSVLGREGDAA------LAKDSAAGSXXXXXXXXPRPREDNLVPSRPAXXXXXXXXXXXXXXXXXMSGQEGDAAVVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGVADT---GVFDSCPPSTGASPSEPGSQRSLSVGTVPQFLSMPLMLAAREKASAAVAAWQKDRRNSPRPRPPVSPGPAALSQASPLKSAFRFRKPSAASEHDDEGPERTLPSSASATLG--GGARKILSAPLLSRTLSALSSAASHASHGLAKASPTTRPPFVPTIELSPRASLPASPHAPGPRITDTAKFYLERAGAAPAPAGDVGLLPPASKAYFGRPSGFSVHVLVASALSAADL---GDRHQQHLEGGGSHSPRLCYSFEDRGRVAEALRPGDVVLLTPGRYEARAWGLQRLVSSVEIIGAGDAADCVLYNDPACS----GPAGEHYLVGVMGGALGSAAGGGASVPEVKGKDVVADEDDSDSGFEDGALGPANSLVHSFSSRAVRVRLANLTLEQGSGYRGAVYQLGRESHLEMDGCTVVGSKGGVNVDQGTCIIRDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGG------------XXXXXXXXXXXXXXXXXXXXXXXTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSAAVLLRDHLQGQHREGSVVSEGNQCHLNRGCDLARCSGGGAAEEIGVXXXXXXXXXXXXXXXXXXXXAGEGEGLEPEVGGQEICEEVSRDGPGE--GETRTRTLRGQQ-------TCVPTAEEEGLPLPSAMTLRFLAAMDEGYVGSRREENARLKKRR 1413          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5409.13637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI04_ECTSI2.710e-24160.44MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L4X5_9PHAE5.310e-23548.30MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 760..962

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5409contigL-elsbetiae_contig5409:1852..6089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5409.13637.1mRNA_L-elsbetiae_contig5409.13637.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5409 1764..6897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5409.13637.1 ID=prot_L-elsbetiae_contig5409.13637.1|Name=mRNA_L-elsbetiae_contig5409.13637.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1229bp
MQRLSYPGGNSRSRQGSRSGSGGDGKGSTSSSKSPLRSRGAVAAAVKMAL
SRVRRSSHAPENSTSLRGNLSPPPPPPNGESVRRESAPLYPVALEKSKRR
AANQGTLSAVNASGRGPPPPYALVAHRAETVKQAIPPTTSVSTAASGGSS
TTAVGAAARSATKAAERVVAGVRPELPLLKWSSSAGGPPAVRVAPRLPPR
TALSLGHTVSPPRGSPSDERSAGTAAKSPQHTREKEGEKLVGGYEPAAAK
DADALANSPFEKEALAGQMKAWVDGPQLSKQVEDGARLVGIRGEEDTDEP
TPERRVGAQSQGMFDATHGVGVPSLAKDSTEGSAAGSTTGQEVNTVRVRP
SLSKDSSDNLSKNSSDNLSKDWSDTLSSDSAAGSTAGQEVNPAVGVRPFL
SENLMDSLSQDSEAGSTAGQEGCTVPVRVSLDKDSANRLSRHSAAASAAG
YESGTATVQPNPETSDSFSHGSAAASTAVQEEMRLPMDPPPPILPPSATS
DTSGLARASIDGVFDSCPAAGTDAKSDSHRSLSVGTSPKFHTMPLSLAAK
GITTAVADAWNGTRRASPRPRPPVSPGPAALSNSFRSRARSATEPDDALS
RTLPSGATAASGRNGAAAVAGSSPPRTASPRSLSAGSRRASPRSGMATPR
SPPFVPAIQLSPQGKLQASPHAPGPRPTETAAFYRGRLGELPPPAGAVRL
PPPSRTYLGRPEGFSLHVLVASAPTRADLAPEGGGLPVVAGGGKDNCPRL
YYSFEDRGRVAAALQPGDVVLVTPGRYEARAWGLQRLVFSVEIVGAGVAG
DCVIYNDPAASASDSGLAREHYLLGVMGGTLGSAGGDRASVPEVKGKDNA
DDDSDSGFEDGAFGAAASSITSLGRKAVRVRLANLTLEQGSGYRGAVYQL
GRESHLEMEGCAVVCSQGGVNIDQGTCAICDSTISGSEAFGVHIGGEGAV
EHCLIRDCGRGGRSRRHRGGNQQGAEALPPGADDDGAAAAAEAEDDGTDV
NRVEGMPAVSFLQSSRVRVRFSVIRDNAGHSLQCRDAPLPGGDGKYAMLA
RRAEAEAEEKLRSWLGSAAVLLREHLQGQHREGSIVSERNLCKLNRGCDR
AGCGGNGRHRRGGTAEGGTTACLAAGEVSAGAGAGAVSAGGEERSVGGGG
GGGSGETSGRQPPRGDRGSDKATETGATCVPTAEEEGLPLPAAMTLRFLA
AMDEGYIGSRREENARLKRRRMREEMAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence