prot_L-elsbetiae_contig5383.13593.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5383.13593.1
Unique Name	prot_L-elsbetiae_contig5383.13593.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	270

Homology

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: D7FUY8_ECTSI (Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY8_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.750e-100
Identity = 162/168 (96.43%), Postives = 162/168 (96.43%), Query Frame = 0

Query:    1 LPTGGGKPNV-TSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQ 167
            LP GGGK  V TSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDE TRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDK LSRDLHTGYVEWQ
Sbjct:  370 LPAGGGKAAVVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEGTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKTLSRDLHTGYVEWQ 537

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: A0A6H5JUU8_9PHAE (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU8_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 1.080e-93
Identity = 151/191 (79.06%), Postives = 163/191 (85.34%), Query Frame = 0

Query:   30 MADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSV-------------SDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLISEGIDPSIFTFTDDEEHASRMMEDMKVS 207
            MADSFDSSPGF AVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDE TRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSV             + +   R  ++  +ISGFEYTSKLQRMFVDK LSRDLHTGYVEWQE RIR+R A++I EG+DP++FTFTD+EEHASRMM DMKVS
Sbjct:    1 MADSFDSSPGFSAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEGTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVMALGGNLDPTTYRAGDINLRRWRSSNQISGFEYTSKLQRMFVDKTLSRDLHTGYVEWQEKRIRERHARMIEEGMDPTVFTFTDEEEHASRMMNDMKVS 191

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: A0A835YSZ1_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ1_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.240e-76
Identity = 123/164 (75.00%), Postives = 147/164 (89.63%), Query Frame = 0

Query:    6 GKPNV-TSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQE 168
            GKP   TSD+VVAAML VY+HY+GL+ +SF ++  FR VLDEACK+FVNA+P A EWLAR+AHCLLD+ F+ES+++ED R+E+LD VGFLFAYIADKD+FHKYY+KLLSKRIIQLTSVS++AEERML NMR+ISGFE+TSKLQRMFVDK LSRDLHTGY+EW E
Sbjct:  394 GKPTAATSDEVVAAMLRVYQHYRGLVGESFMNAAAFRGVLDEACKAFVNAMPSAPEWLARHAHCLLDRSFRESRIEEDARREALDRVGFLFAYIADKDVFHKYYAKLLSKRIIQLTSVSNDAEERMLDNMRRISGFEFTSKLQRMFVDKTLSRDLHTGYMEWLE 557

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: W7TEJ5_9STRA (Cre-cul-1 protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEJ5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.240e-33
Identity = 70/172 (40.70%), Postives = 104/172 (60.47%), Query Frame = 0

Query:    8 PNVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLI 179
            P+    D +  ML++Y HY  L+  +F     F      AC+ F+NA+P  SE LA +AH  LDK   ES+++      +LD +  LF +I DKD+FH+ Y++LL+ RII  +SVSDEAE RM+K++ ++ GF+Y    QRMF+DK LS +L   + EW+     Q+Q  L+
Sbjct:  198 PDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFINALPNMSESLAIHAHYFLDKNCPESRMENV--DVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEWEREHRAQQQRLLL 367

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: A0A4D9CZD0_9STRA (CULLIN_2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZD0_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.830e-33
Identity = 69/172 (40.12%), Postives = 104/172 (60.47%), Query Frame = 0

Query:    8 PNVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLI 179
            P+    D +  ML++Y HY  L+  +F     F      AC+ F+NA+P  SE LA ++H  LDK   ES+++      +LD +  LF +I DKD+FH+ Y++LL+ RII  +SVSDEAE RM+K++ ++ GF+Y    QRMF+DK LS +L   + EW+     Q+Q  L+
Sbjct:  419 PDYVCSDTIQTMLDIYSHYLTLVRVTFKDDSRFAKAFKTACEHFINALPNMSESLAIHSHYFLDKNCPESRMENV--DVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSREFAEWEREHRAQQQRLLL 588

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: V5I1H9_BYSSN (Cullin n=3 Tax=Eurotiales TaxID=5042 RepID=V5I1H9_BYSSN)

HSP 1 Score: 132 bits (333), Expect = 2.120e-31
Identity = 74/177 (41.81%), Postives = 109/177 (61.58%), Query Frame = 0

Query:   16 VAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVN-------AVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLISEGIDP 185
            V A+L+V+  Y  L+A +F     F   LD AC+ FVN       +  ++ E LARY   LL KG K   V+E   +E L  +  +F YI DKD+F K+YSK+L+KR++ ++SVSD+AE  M+  +++  GFEYT+KLQRMF D  +S+DL+T Y +WQ+  + +   K   + IDP
Sbjct:  355 VDALLQVHTRYSNLVAAAFAGESEFVRSLDNACREFVNRNKICKSSSTKSPELLARYTDSLLKKGSKA--VEESELEEMLVQIMTVFKYIEDKDVFQKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNTSYRDWQDKVLDEEDRK---KSIDP 526

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: A0A022W404_TRIRU (CULLIN_2 domain-containing protein n=3 Tax=Trichophyton TaxID=5550 RepID=A0A022W404_TRIRU)

HSP 1 Score: 132 bits (332), Expect = 2.790e-31
Identity = 73/187 (39.04%), Postives = 112/187 (59.89%), Query Frame = 0

Query:    6 GKPNVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVN-------AVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLISEGIDP 185
            G  +V     V ++L+V+  Y+ ++ ++F     F   LD AC+ FVN       +  ++ E LARY   LL KG K S  +E   +E L  +  +F YI DKD+F K+YS++L+KR++ ++SVSD+AE  M+  +++  GFEYT+KLQRMF D  +S+DL+T Y EWQE    +   K +   +DP
Sbjct:  330 GSESVDPKVYVDSLLQVHGKYRSMVDEAFAGETEFVRSLDNACREFVNRNALCTTSSTKSPELLARYTDSLLKKGSKSS--EESELEELLVQIMTVFKYIEDKDVFQKFYSRMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNTNYREWQERTFDEEDRKKM---VDP 511

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: D4AZ42_ARTBC (CULLIN_2 domain-containing protein n=17 Tax=Arthrodermataceae TaxID=34384 RepID=D4AZ42_ARTBC)

HSP 1 Score: 132 bits (331), Expect = 3.720e-31
Identity = 73/187 (39.04%), Postives = 111/187 (59.36%), Query Frame = 0

Query:    6 GKPNVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVN-------AVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLISEGIDP 185
            G   V     V ++L+V+  Y+ ++ ++F     F   LD AC+ FVN       +  ++ E LARY   LL KG K S  +E   +E L  +  +F YI DKD+F K+YS++L+KR++ ++SVSD+AE  M+  +++  GFEYT+KLQRMF D  +S+DL+T Y EWQE    +   K +   +DP
Sbjct:  312 GSEGVDPKVYVDSLLQVHGKYRSMVDEAFAGETEFVRSLDNACREFVNRNALCTTSSTKSPELLARYTDSLLKKGSKSS--EESELEELLVQIMTVFKYIEDKDVFQKFYSRMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNTNYREWQERTFDEEDRKKM---VDP 493

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BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: A0A1L9SS48_9EURO (CULLIN_2 domain-containing protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SS48_9EURO)

HSP 1 Score: 132 bits (331), Expect = 3.940e-31
Identity = 70/171 (40.94%), Postives = 105/171 (61.40%), Query Frame = 0

Query:   16 VAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVN-------AVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLI 179
            V A+L+V+  Y+ L+ D+F+    F   LD AC+ FVN       +  ++ E LARY   LL KG K +  +E   +E L  +  +F YI DKD+F K+YSK+L+KR++ + SVSD+AE  M+  +++  GFEYT+KLQRMF D  +S+DL+  Y +WQE  +     K +
Sbjct:  357 VDALLQVHTRYQSLVNDAFNGESEFVRSLDNACREFVNRNTICKSSSTKSPELLARYTDSLLKKGAKAA--EESELEEMLVQIMTVFKYIEDKDVFQKFYSKMLAKRLVHVNSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNANYRDWQEKVLDDEDRKKL 525

[Close]

BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Match: A0A232M0K7_9EURO (CULLIN_2 domain-containing protein n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232M0K7_9EURO)

HSP 1 Score: 131 bits (330), Expect = 6.250e-31
Identity = 72/177 (40.68%), Postives = 109/177 (61.58%), Query Frame = 0

Query:   16 VAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVN-------AVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKALSRDLHTGYVEWQETRIRQRQAKLISEGIDP 185
            V A+L+V++ Y+ L+  +FD    F   LD AC+ FVN       +  ++ E LARY   LL KG K +  +E   +E L  +   F YI DKD+F K+YSK+L+KR++ ++SVSD+AE  M+  +++  GFEYT+KLQRMF D  +S+DL+  Y +WQ+  + +   K +   IDP
Sbjct:  715 VDALLQVHKRYQNLVDTAFDGESEFVRSLDNACREFVNRNQICKSSSTKSPELLARYTDSLLKKGSKAT--EESELEEMLGQIMTAFKYIEDKDVFQKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNASYRDWQDRVLDEDDRKKM---IDP 886

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5383.13593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FUY8_ECTSI	1.750e-100	96.43	Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ecto...	[more]
A0A6H5JUU8_9PHAE	1.080e-93	79.06	CULLIN_2 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A835YSZ1_9STRA	1.240e-76	75.00	Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=...	[more]
W7TEJ5_9STRA	1.240e-33	40.70	Cre-cul-1 protein (Fragment) n=1 Tax=Nannochlorops...	[more]
A0A4D9CZD0_9STRA	1.830e-33	40.12	CULLIN_2 domain-containing protein n=1 Tax=Nannoch...	[more]
V5I1H9_BYSSN	2.120e-31	41.81	Cullin n=3 Tax=Eurotiales TaxID=5042 RepID=V5I1H9_...	[more]
A0A022W404_TRIRU	2.790e-31	39.04	CULLIN_2 domain-containing protein n=3 Tax=Trichop...	[more]
D4AZ42_ARTBC	3.720e-31	39.04	CULLIN_2 domain-containing protein n=17 Tax=Arthro...	[more]
A0A1L9SS48_9EURO	3.940e-31	40.94	CULLIN_2 domain-containing protein n=1 Tax=Penicil...	[more]
A0A232M0K7_9EURO	6.250e-31	40.68	CULLIN_2 domain-containing protein n=1 Tax=Elaphom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016158	Cullin homology domain	SMART	SM00182	cul_2	coord: 89..206 e-value: 4.7E-9 score: 42.1
IPR016158	Cullin homology domain	PROSITE	PS50069	CULLIN_2	coord: 57..189 score: 22.436
IPR001373	Cullin, N-terminal	PFAM	PF00888	Cullin	coord: 11..173 e-value: 1.7E-51 score: 175.6
None	No IPR available	GENE3D	1.20.1310.10		coord: 59..172 e-value: 6.3E-31 score: 108.8
None	No IPR available	GENE3D	1.20.1310.10		coord: 6..58 e-value: 1.7E-7 score: 33.0
None	No IPR available	PANTHER	PTHR11932	CULLIN	coord: 15..170
None	No IPR available	PANTHER	PTHR11932:SF81	CULLIN-1	coord: 15..170
IPR016159	Cullin repeat-like-containing domain superfamily	SUPERFAMILY	74788	Cullin repeat-like	coord: 14..54
IPR036317	Cullin homology domain superfamily	SUPERFAMILY	75632	Cullin homology domain	coord: 52..171

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5383	contig	L-elsbetiae_contig5383:8404..12146 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5383.13593.1	mRNA_L-elsbetiae_contig5383.13593.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5383 8404..12148 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5383.13593.1 ID=prot_L-elsbetiae_contig5383.13593.1|Name=mRNA_L-elsbetiae_contig5383.13593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=270bp
LPTGGGKPNVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKS
FVNAVPQASEWLARYAHCLLDKGFKESKVDEDTRQESLDHVGFLFAYIAD
KDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMF
VDKALSRDLHTGYVEWQETRIRQRQAKLISEGIDPSIFTFTDDEEHASRM
MEDMKVSGGGGGGAASMFGSSGGGGPGMASTAAATAAGAAAGAAAASGGG
LGALSSSGGGGPSTSRRAPP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016158	Cullin_homology
IPR001373	Cullin_N
IPR016159	Cullin_repeat-like_dom_sf
IPR036317	Cullin_homology_sf