prot_L-elsbetiae_contig5382.13591.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5382.13591.1
Unique Nameprot_L-elsbetiae_contig5382.13591.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length386
Homology
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: D7FHR8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR8_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 1.250e-132
Identity = 191/277 (68.95%), Postives = 229/277 (82.67%), Query Frame = 0
Query:   44 ETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRR 320
            +T+I VG AD+ G +V+ + ++ +KRHP IS++WV GL++S LASGYTP+  A+QNYE KM  L+DE +  A+ EM+YWD IYRRSKGMFWTC+ QCTAN++E+E+RR  YLDLNK YLKG A+AKSELGIFSEDGVEETRDLFWRKVSGGKQ+AKRATMWDA+FVG+GTM+RRDEGLA+I+ARIAF+FV+NLT+GLFMAVFQFLFS+W VIWSYQPDP+ST+AFAAMA+L                   GVY VAKLAETAQIEAARQ  GQDPRR
Sbjct:   10 QTSIVVGGADQFGALVVSNAKQLVKRHPVISVSWVVGLLVSTLASGYTPSTTAMQNYENKMIGLDDESVMRAQGEMVYWDDIYRRSKGMFWTCNEQCTANRKEFERRRKTYLDLNKAYLKGEADAKSELGIFSEDGVEETRDLFWRKVSGGKQFAKRATMWDAMFVGIGTMTRRDEGLASIVARIAFRFVVNLTMGLFMAVFQFLFSMWTVIWSYQPDPLSTLAFAAMAALGAVSMLATWLLGLAAVGVTGVYTVAKLAETAQIEAARQQ-GQDPRR 285          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A835Z0D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 5.170e-50
Identity = 97/239 (40.59%), Postives = 143/239 (59.83%), Query Frame = 0
Query:   38 QPQTRHETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLN--DEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASL 274
            QP  ++  A+AV   D     V +       RHP ISL+WV GL ++I+A+G+TP P+A++ Y   +  L   +  L +A+ E   W+  Y  SKG FW CD  C  N + + Q R       + Y   +AEAKS LGIFS  GV E RDLFWR+V+GG+++A+R+T++DA+F G+G+M RRD  +A  +  +A + + N++IG   A+  FL+SVW VI ++QP  V  + F   ASL
Sbjct:    2 QPPNQNNGAVAVRLNDLTLTTVAKGAAGVAVRHPVISLSWVAGLFLAIMATGFTPAPQAMEAYSFAVEDLKFYENELLQAQYEYDSWNVEYHESKGWFWQCDDHCQENYKSFVQAREDLRGKQRSYDGKLAEAKSHLGIFSTLGVAEARDLFWRRVAGGREFARRSTLYDAIFAGIGSM-RRDSSMAEYVMTMAVQVLWNMSIGAVGALVTFLWSVWGVIATFQPSAVVALLFFMCASL 239          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S0C9V1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9V1_9STRA)

HSP 1 Score: 169 bits (428), Expect = 4.100e-46
Identity = 98/282 (34.75%), Postives = 153/282 (54.26%), Query Frame = 0
Query:   47 IAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILA-SGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRRRPQFAPH 327
            I + ++ + G + +   + F KR+  I+ +++FGL++ +L  SGY  + E    Y   M++++ +   +A  +    ++ YR +KG F++CD+ C  NK   E  +     +  +    +++AK+  GIFSE GV E +D FW     GKQ+AKR TMWDA+F GM +M R DE +   + ++    +IN ++GL MA+F F+F +W+++ SYQPDP++ VAF   AS                     VY VAKLAE        QGGGQ  RR  Q  PH
Sbjct:   21 IVIPNSSDFGALAVSGVKAFAKRNKVITGSYLFGLIIVVLGGSGYQLSREQSIQYNQIMSTIDLKAEYDASNKYASANQAYRATKGWFFSCDSLCQRNKSRMEHAKRDLGMIRAEGYNRMSDAKASAGIFSEVGVGEVKDSFWEYFQSGKQFAKRQTMWDALFTGMRSMGR-DESMMEYVLKVLMNALINFSLGLIMALFIFIFGLWSIVKSYQPDPLTAVAFFLSASCAAFAFVSTFLFFMYGAAAGSVYGVAKLAEANMRIDNGQGGGQ--RRNMQNRPH 299          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S2A693_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A693_TRICV)

HSP 1 Score: 160 bits (404), Expect = 9.360e-43
Identity = 96/272 (35.29%), Postives = 149/272 (54.78%), Query Frame = 0
Query:   43 HETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGL-VMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAET-AQIEAARQ 312
            H+  +A G  D +G + +R    F KRH  IS ++VFGL V+ ++ SG   T +  + Y+  M++++     +A     +    YR SKG F +CD+ C  NK   E  R    D+  +    +++AK   G+FSE GV E +D FW +   GK++AKR +MWDA+F+GM +M R DE  A    ++  + +IN +IGL MA+F F+F +W ++ SYQPDP++ +AF   A                     G+Y +AK+AET  +IE  R+
Sbjct:    7 HDGQLARGQGD-IGTLALRGAAAFAKRHKVISGSYVFGLLVLLLVGSGTKLTLDQRRQYDHIMSTIDLNAEFDASNRYAHAMHAYRASKGWF-SCDSLCQRNKARMEDARAALEDIRAEGYNRMSDAKRVAGLFSEVGVGEVKDSFWERFHAGKRFAKRQSMWDAMFMGMRSMGR-DESFAEYALKMIVQVLINFSIGLVMALFIFIFGLWGIVRSYQPDPLTALAFFLSAVCAAFAFVTTYLLLIYGATAGGLYGMAKMAETNMRIEQGRR 275          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S2WRM9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRM9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.780e-42
Identity = 89/261 (34.10%), Postives = 140/261 (53.64%), Query Frame = 0
Query:   45 TAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETA 305
            TA    S D++   +IR G  F KRH  ++ A++ G+V+ + A G+  + E  Q YE  ++ ++ + +  A+      +  YR SKG F +CD  C AN +EY+       ++ K++ +  +EAKS +G+FSE GV+E RDLFW + +GGK +AKR++ WD +F+ +G+M R DE L     R     ++N TIGL  A+  F + VW +I SYQP  +    F  +AS+                    VY  AK+A  +
Sbjct:   10 TAETQLSVDDVSTALIRHGVAFAKRHYVMTSAYIVGVVIMLFAGGFAVSMEQEQKYERILSQIDLKRMHRAQVAAQNAEYNYRESKGWF-SCDNHCMANYEEYQLNLARLAEVEKEFAEIQSEAKSVVGVFSEYGVQEVRDLFWSQFAGGKDFAKRSSWWDLIFMSIGSMGR-DESLMEFALRFLMNMLMNFTIGLVGALIGFYWFVWGIITSYQPSVLIAFVFFMLASIAATSCVVSFLLGLYSAAAGSVYVAAKIASNS 268          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S1IGG2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGG2_9EUGL)

HSP 1 Score: 159 bits (402), Expect = 7.860e-42
Identity = 88/256 (34.38%), Postives = 134/256 (52.34%), Query Frame = 0
Query:   53 DEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIE 308
            +++G V++       KR+  ISL WV GL+++  A+G+  + +    YE  M  +N E L  AE        +Y   KG FWTCDA CT  K EYE              + +++AK E+GIFS  GVEETR LFW+    GK +AKR +MWD +F+G+G    RD+GLAA + ++  + ++N T+GL  A   F++S+W V+ S+QP     + F  +AS+                   GV  + K A +  ++
Sbjct:   82 EDLGSVMLSGAVSVAKRNWKISLTWVVGLLLASFATGFAVSEDQRVKYESMMQDINTEPLMAAEDAAYRVRGLYESHKGWFWTCDALCTQYKTEYEAAAKQLEHEQSIVNRQISDAKGEVGIFSTYGVEETRRLFWKSFGQGKDFAKRQSMWDLLFLGVGR--GRDDGLAAYLIKLLLQVLLNFTLGLIGATIGFIWSLWGVVSSFQPGIAERLLFFGLASVAACAFMASWLIGLYTAAAGGVVVLGKAAHSLALQ 335          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S1G116_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G116_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.230e-41
Identity = 102/297 (34.34%), Postives = 161/297 (54.21%), Query Frame = 0
Query:   33 MSSRRQPQTRHETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSI-LASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSR-RDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRRRPQFAPH 327
            M +RRQP       IA  S   MG +V++  + F K +P I+  ++FG+V+ + + +G   T +    Y+  M++++ +   +A +     +  Y  SKG F +CD+ C  NK+  E  +     +  +    +++AK   G+FSE G+ E +D FW   + GK++AKR TMWDA+FVGM +MSR RDE +     +I  + +IN ++GL MA+F F+F +W +I SYQP P+  V F  MA+                    GVY+VA+LA+ A +    + GGQ  RR+ Q  PH
Sbjct:    1 MDNRRQP----GGTIANASMPPMGPLVVQGVKSFAKHNPIITSTYLFGIVVLLTVGTGTKLTFDQQNQYDRIMSTIDLDAEYDAASRYAAANNAYYHSKGWF-SCDSYCQRNKKRMENSKKEVDAVRAEGNARMSDAKKVAGLFSEVGIGEVKDSFWALFNQGKRFAKRQTMWDALFVGMRSMSRGRDESIIEFGLKILLQLLINFSLGLLMALFLFVFGLWTIIKSYQPSPMMAVLFFVMATSAAFAFVATFLLALYGAAAGGVYSVAQLAQ-ANMRLQAESGGQ--RRQFQQRPH 289          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S1D1B9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1B9_CYCTE)

HSP 1 Score: 152 bits (384), Expect = 5.870e-40
Identity = 89/259 (34.36%), Postives = 149/259 (57.53%), Query Frame = 0
Query:   54 EMGRVVIRSGQRFIKRHPAISLAWVFG-LVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWD--KIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKG---VAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQ 306
            ++G +++R   RF  R+  +S +++FG LV+  + SG   T +  + Y   M +++  + AE EA   Y +    Y+ +KG F++CD+ C  NKQ  ++ +   LDL+    +G   +++AK+  G+FSE GV+E ++ FW     GK +AKR++MWDA+F+G+ +MSR DE +A    R+  + + N ++GL MA+  F+  +WN++ SYQP+P+  VAF   A+L                   G+Y + KLAET Q
Sbjct:    2 DLGGIIVRGVTRFAHRNKVLSGSYLFGILVLIFMGSGTQLTLQQRREYNKIMDTID--IRAEYEASQRYANARNAYQSTKGWFFSCDSLCQRNKQRMDRAK---LDLDSVREEGNARMSDAKAVAGLFSEIGVDEVKESFWSYFQSGKDFAKRSSMWDAMFIGLRSMSR-DETMAEYALRLIIQILFNFSLGLIMALVIFVIGLWNIVSSYQPNPIVAVAFFLCAALAAFSFVISYLLVMYGAVAGGMYGIVKLAETNQ 254          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A1Z5KJS4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJS4_FISSO)

HSP 1 Score: 152 bits (384), Expect = 9.830e-40
Identity = 87/264 (32.95%), Postives = 140/264 (53.03%), Query Frame = 0
Query:   47 IAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSIL--ASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKI--YRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSR-RDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETA 305
            IA+ + D+MG +++R    FI+R+P +S  +  G+++ I+    G   TPE  Q+YE        ++ AE  A   YW     Y+ S+G  W CDA CT N Q  ++   I   + ++     A+AK+  G+ SE G+ E +D FW     GK++AKR TMWD +F+G+ +MSR RDE       ++  + ++NL++GL MA+  F+  +W ++ SYQP+P+  V F    ++                   GVY + K+AE A
Sbjct:   12 IALPNPDQMGTLILRGSVAFIRRNPVVSGTYFLGILLLIIFGGGGRPLTPE--QHYEYHRILQTVDLQAEYRATDDYWRAYHAYQASRGWLWGCDAVCTRNYQRMKEAERIMHLIQQEGAARTADAKNAAGLLSEIGIGEVQDSFWGYFHAGKRFAKRQTMWDMMFMGIRSMSRGRDESWMEFAVKVLLQVLLNLSMGLVMALIFFVMGLWTIVRSYQPNPLVAVLFFCGGAIAAFSFVVTYLLAVYGAAAGGVYTILKVAENA 273          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S2WBN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBN5_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.210e-38
Identity = 87/269 (32.34%), Postives = 141/269 (52.42%), Query Frame = 0
Query:   59 VIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRRRPQFAPH 327
            ++R      K+H A++ +++ GL++    +G+    E    Y+  + ++++  L  A          YR S+G FWTCD +C  +KQ Y   +       +   + V +AK ++G+FSE GV+ETRD+FW+  +GG+Q+ +R +MWD +F G      RDE L  ++ R   +   N TIG+ MA+  FLF VW+VI SYQPDPV+ + F A A++                    +  VAK+A    ++  R+  GQD RR  +  P+
Sbjct:   38 LLRGTVGLAKKHKAVTGSYLLGLLLLAFGTGFRVAEETQAAYQATLDTVDEAGLQHAHESFYAAQDRYRSSQGWFWTCDQKCQVHKQRYLDAKARLDSALEQERRVVRDAKKQVGLFSEYGVQETRDVFWQYFAGGRQWGQRQSMWDLLFAGFRW--GRDEELFTVVCRWLLELAFNFTIGMVMALIMFLFGVWSVISSYQPDPVTGLVFYAAAAITAVSCVATYLLCIYGATAGSIAVVAKVA----VDHNRRL-GQDQRRSGRRIPY 299          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHR8_ECTSI1.250e-13268.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0D4_9STRA5.170e-5040.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0C9V1_9STRA4.100e-4634.75Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2A693_TRICV9.360e-4335.29Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2WRM9_9STRA5.780e-4234.10Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S1IGG2_9EUGL7.860e-4234.38Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1G116_9STRA2.230e-4134.34Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1D1B9_CYCTE5.870e-4034.36Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5KJS4_FISSO9.830e-4032.95Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2WBN5_9STRA1.210e-3832.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15572:SF0GLUTAMINE-RICH PROTEIN-RELATEDcoord: 9..369
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..266
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..385
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 267..298
NoneNo IPR availableTMHMMTMhelixcoord: 274..296
NoneNo IPR availableTMHMMTMhelixcoord: 232..254
IPR038842BRD4-interacting chromatin-remodeling complex-associated proteinPANTHERPTHR15572GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1coord: 9..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5382contigL-elsbetiae_contig5382:1593..6011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5382.13591.1mRNA_L-elsbetiae_contig5382.13591.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5382 1593..6011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5382.13591.1 ID=prot_L-elsbetiae_contig5382.13591.1|Name=mRNA_L-elsbetiae_contig5382.13591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=386bp
TRTTPSLTEHTVAVAALQQGADRQTASRGRSKMSSRRQPQTRHETAIAVG
SADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNY
EVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQR
RNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKR
ATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFS
VWNVIWSYQPDPVSTVAFAAMASLAAVSLLATWLLGLAAVGVTGVYAVAK
LAETAQIEAARQGGGQDPRRRPQFAPHSQQQQQQQRQQQQQQQQQPYQQQ
QQQQQQQQQQQQQPRRRPAAAAAAPSMSTNWNSID*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038842BICRA