prot_L-elsbetiae_contig538.13584.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig538.13584.1
Unique Nameprot_L-elsbetiae_contig538.13584.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length345
Homology
BLAST of mRNA_L-elsbetiae_contig538.13584.1 vs. uniprot
Match: A0A6H5KUE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE4_9PHAE)

HSP 1 Score: 415 bits (1067), Expect = 1.570e-141
Identity = 219/294 (74.49%), Postives = 238/294 (80.95%), Query Frame = 0
Query:   14 MALRGLTALLVLLLSFL-HASAWFTP-----GLVHQSRHMSQVASTPARAAV-----ARRGG------RQVLTCKLDRLPARTLKRVVPLRPTTEKYLAFFGQTPFERRRKTINMLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPMVGSYNRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRTHFQMLVEDESGRELLFDVPPVPEYRQVRRGMQCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWNLLRERTERDR 290
            M +  ++ALL LLLSF  H  AW  P     GL+   +     A+TP   AV     ARR        RQV TC+LDRLP RTLKRVVPLRPT EKYLA FGQTP +RRRK +N LGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRP+VGSYNRALELWG+GS+E RRKTKGALFTGRVT+TGFALS QAS HR HFQMLVEDESGRELLFDVP VPEYR++R+GM CAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFW+LL ++  R R
Sbjct:    1 MKVSRVSALLPLLLSFFQHTHAWTVPLPLSGGLIAPCQQ--SFAATPVTPAVTATTTARRSHDGRDTRRQVPTCRLDRLPVRTLKRVVPLRPTPEKYLAHFGQTPLDRRRKMVNFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGSGSREERRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRRIRKGMSCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHDKNARKR 292          
BLAST of mRNA_L-elsbetiae_contig538.13584.1 vs. uniprot
Match: D8LS48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS48_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 8.130e-139
Identity = 213/273 (78.02%), Postives = 228/273 (83.52%), Query Frame = 0
Query:   19 LTALLVLLLSFL-HASAWFTP-----GLVHQSRHMSQVAS--TPARAAVARRGG-------RQVLTCKLDRLPARTLKRVVPLRPTTEKYLAFFGQTPFERRRKTINMLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPMVGSYNRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRTHFQMLVEDESGRELLFDVPPVPEYRQVRRGMQCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR 276
            ++ALL LLLSF  H  AW  P     GL+   +  S VA+  TP+  A   R         RQV TCKLDRLP RTLKRVVPLRPT EKYLA FGQTP +RRRK +N+LGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRP+VGSYNRALELWGAGS+EARRKTKGALFTGRVT+TGFALS QAS HR HFQMLVEDESGRELLFDVP VPEYR++R+GM CAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR
Sbjct:    6 VSALLALLLSFFQHTRAWTAPLPLSGGLIAPGQQ-SFVATPVTPSVTATTTRSSHDWRDRRRQVPTCKLDRLPVRTLKRVVPLRPTPEKYLAHFGQTPLDRRRKMVNVLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRRIRKGMHCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR 277          
BLAST of mRNA_L-elsbetiae_contig538.13584.1 vs. uniprot
Match: A0A835YT15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT15_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.180e-10
Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = 0
Query:  103 ERRRKTINMLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPMVGSYNRALELWGAGSKEARRK-TKGALFTGRVTRTGFALSPQASKHRTHFQMLVEDESGRELLFDVPPVPEYRQVRRGMQCAVVVLSRS--SGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWNLLRERTER 288
            +R  K        F   WA +F +   + LG    + I      +       L P + +Y +  E  G  +   +   T+ ALF+  +      ++P   K   + ++ V DE GR L+  VP V E  +V  GM   V+++S     GF ++ GV++AY+P +DL+VG +P L+K     LL ER  R
Sbjct:   17 QRAGKVAESFSVAFLGVWACYFTS---FFLGVAITSVIG-----VVFVFYWLLGPNLLNYRKNWEFRGKLAPSPKEPGTRAALFSASIANVVEEVNPITGK-AANLRLEVADEEGRALMLRVPAVREAARVEAGMGIEVLLISDEPGGGFEDILGVSDAYIPAIDLWVGDYPHLNKLALRRLLNERYRR 196          
BLAST of mRNA_L-elsbetiae_contig538.13584.1 vs. uniprot
Match: A0A5B8NL37_9CHRO (Phosphate ABC transporter permease n=1 Tax=Euhalothece natronophila Z-M001 TaxID=522448 RepID=A0A5B8NL37_9CHRO)

HSP 1 Score: 55.8 bits (133), Expect = 2.050e-5
Identity = 60/248 (24.19%), Postives = 103/248 (41.53%), Query Frame = 0
Query:   81 KRVVPLRPTTEKYLAFFGQTPFERRRKTINMLG------------------GLFAF----YWA---AFFATR--NVYVLGPGGINAIAWRGSCLAVFLQTFLRPMVGSYNRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRTHFQMLVEDESGRELLFDVPPVPEYRQVRRGMQCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWNLLRERTERDRRGRSSAVTAGR 301
            ++++PL  T  +Y  + G  P   R+  I+ LG                   LFAF    YW     ++ATR  + Y   P    A  WRG+ L  F+   L     + N   EL    ++E R                               + V D++G E+    P +  +R ++ G    ++ LS+      ++ VT+AY+P+LD++V  +P+L + +F  +  E + R RR R+ A ++ R
Sbjct:   11 EQLIPLTGTAAQYRYYAGSWPDFLRKLLISFLGVVVIWLLGEITNSGGATVSLFAFIAGLYWLWSPVYWATRRNSSYRRFP---YAGFWRGNVLEAFVSEELLGTEETVNEYGELVIVENRERR-----------------------------INLQVGDKNGFEIQIQAPLLRLHRNIKPGQVVELLALSKDPDLERISKVTDAYIPQLDIWVSNYPVLRRDIFVEVSEELSGR-RRKRTKASSSRR 225          
BLAST of mRNA_L-elsbetiae_contig538.13584.1 vs. uniprot
Match: UPI001685FDD9 (hypothetical protein n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI001685FDD9)

HSP 1 Score: 54.3 bits (129), Expect = 6.230e-5
Identity = 53/216 (24.54%), Postives = 97/216 (44.91%), Query Frame = 0
Query:   80 LKRVVPLRPTTEKYLAFFGQTPFERRRKTINMLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQT---FLRPMVGSY--NRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRTHFQML-VEDESGR-ELLFDVPPVPEYRQVRRGMQCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWNLLRERTER 288
            ++ V PL PT ++Y  ++G      RR  ++ LG +  F+  +F     +++L    I+ + W    +    Q    F  P   ++     + +WG  ++E   K +     GR+           S  R  F  L + D+ G       VP  PE+RQ+ R      +++S    F  +  +++AYLP++D++V  +P L + VF ++ R  T R
Sbjct:   10 IEEVCPLVPTGDQYQYYWGTPQDVLRRVAVSCLG-VVGFWILSFGLGSLMFLLSM--ISFLYWLWGPIYWAAQRNRRFRAPQYAAFWQGEVVRVWG--TEEIVEKREKVNDRGRLV---------VSHERKPFLNLEIGDKDGFWTTALKVPFKPEHRQISRRQAVCCLLMSDEPEFERINRISDAYLPDVDVWVSDYPYLRRDVFGDIYRYLTVR 211          
BLAST of mRNA_L-elsbetiae_contig538.13584.1 vs. uniprot
Match: A0A6N2E887_9CYAN (Uncharacterized protein n=1 Tax=Cyanobium sp. PLM2.Bin73 TaxID=2480217 RepID=A0A6N2E887_9CYAN)

HSP 1 Score: 53.9 bits (128), Expect = 7.870e-5
Identity = 53/210 (25.24%), Postives = 93/210 (44.29%), Query Frame = 0
Query:   80 LKRVVPLRPTTEKYLAFFGQTPFERRRKTINMLGGLFAFYWAAFFATRNVY-----VLGPGGINAIAWRGSCLAVFLQTFLR--PMVGSYNRAL-ELWGAGSKEARRKTKGALFTGRVTRTGFALSPQASKHRTHFQMLVEDESGRELLFDVPPVPEYRQVRRGMQCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWNL 281
            L+R++P   T  ++ A  G      +R  I+++ G+ +   +   A R+ +     V+G   +  + W     A      LR  P    +   + +L+     E RR+   A  +GR+              RT   + +EDE G       P   +++Q+RRGM    +VLS    F  ++ +T+A+LPE+ L+VG +P L +  F  L
Sbjct:   10 LQRLIPAVATGPQFNACSGDPRKLLQRVLISVIVGVISLLVSQTLAFRSQFAPILLVVGVAALLYVLWGPIVEAGRRNATLRRYPAAAIFEGEVGDLFTQELLEERREQ--ADRSGRLQ--------MVENRRTWLTLELEDEDGYLGRVRFPMEKKHQQIRRGMVVRTLVLSDRKDFSRISALTDAWLPEVKLWVGEYPYLLRPAFEEL 209          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig538.13584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KUE4_9PHAE1.570e-14174.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS48_ECTSI8.130e-13978.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YT15_9STRA7.180e-1028.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5B8NL37_9CHRO2.050e-524.19Phosphate ABC transporter permease n=1 Tax=Euhalot... [more]
UPI001685FDD96.230e-524.54hypothetical protein n=1 Tax=Leptolyngbya sp. FACH... [more]
A0A6N2E887_9CYAN7.870e-525.24Uncharacterized protein n=1 Tax=Cyanobium sp. PLM2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 19..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..130
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..34
score: 0.503
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig538contigL-elsbetiae_contig538:1436..8288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig538.13584.1mRNA_L-elsbetiae_contig538.13584.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig538 1436..8290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig538.13584.1 ID=prot_L-elsbetiae_contig538.13584.1|Name=mRNA_L-elsbetiae_contig538.13584.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=345bp
NTHTGHCCTTGETMALRGLTALLVLLLSFLHASAWFTPGLVHQSRHMSQV
ASTPARAAVARRGGRQVLTCKLDRLPARTLKRVVPLRPTTEKYLAFFGQT
PFERRRKTINMLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVF
LQTFLRPMVGSYNRALELWGAGSKEARRKTKGALFTGRVTRTGFALSPQA
SKHRTHFQMLVEDESGRELLFDVPPVPEYRQVRRGMQCAVVVLSRSSGFY
ELTGVTEAYLPELDLFVGRFPLLDKRVFWNLLRERTERDRRGRSSAVTAG
RKANSLSNTGEGRARHVGSEERAGLGISGGGDGNKGGMNSSYRTR
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