prot_L-elsbetiae_contig5376.13579.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5376.13579.1
Unique Nameprot_L-elsbetiae_contig5376.13579.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length39
Homology
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: D1J759_ECTSI (Cytochrome b6-f complex subunit 5 n=52 Tax=Phaeophyceae TaxID=2870 RepID=D1J759_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 3.620e-13
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            MIEP+LFGMVLGLIPVTLIGLF AAF QYRRGNK
Sbjct:    1 MIEPLLFGMVLGLIPVTLIGLFVAAFLQYRRGNK 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: A0A846FAW0_9CYAN (Cytochrome b6-f complex subunit 5 n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FAW0_9CYAN)

HSP 1 Score: 59.3 bits (142), Expect = 4.970e-11
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            MIEP+L G+VLGLIPVTL GLFAAA+FQYRRGN+
Sbjct:    1 MIEPLLCGIVLGLIPVTLAGLFAAAYFQYRRGNQ 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: PETG_GUITH (Cytochrome b6-f complex subunit 5 n=13 Tax=Eukaryota TaxID=2759 RepID=PETG_GUITH)

HSP 1 Score: 58.5 bits (140), Expect = 1.000e-10
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            MIEP+LFG+VLGLIPVTL GLF AA+ QYRRGN+
Sbjct:    1 MIEPLLFGIVLGLIPVTLTGLFVAAYLQYRRGNQ 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: B7T220_VAULI (Cytochrome b6-f complex subunit 5 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T220_VAULI)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-10
Identity = 25/34 (73.53%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            MIEP+LFG+VLG++PVT+IGLF AA+ QYRRGN+
Sbjct:    1 MIEPLLFGIVLGIVPVTIIGLFIAAYLQYRRGNQ 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: A0A651DUN7_9CYAN (Cytochrome b6-f complex subunit 5 n=1 Tax=Leptolyngbya sp. DLM2.Bin15 TaxID=2480212 RepID=A0A651DUN7_9CYAN)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-10
Identity = 25/34 (73.53%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            M+EP+L G+VLGL+PVTL+GLF AA+FQYRRGN+
Sbjct:    1 MVEPLLSGIVLGLVPVTLLGLFVAAYFQYRRGNE 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: A0A7S6ZPA1_9STRA (Cytochrome b6-f complex subunit 5 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.880e-10
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            MIEP+LFG+VLG+IP TLIGLFAAAF QY RG+K
Sbjct:    1 MIEPLLFGIVLGIIPTTLIGLFAAAFSQYSRGSK 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: A0A2Z5TJI6_9CYAN (Cytochrome b6-f complex subunit 5 n=1 Tax=cyanobacterium endosymbiont of Rhopalodia gibberula TaxID=1763363 RepID=A0A2Z5TJI6_9CYAN)

HSP 1 Score: 57.4 bits (137), Expect = 2.940e-10
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            MIEP+L G+VLGLIP+TL GLF AA+ QYRRGNK
Sbjct:    1 MIEPLLLGIVLGLIPITLAGLFVAAYLQYRRGNK 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: PETG_CYAPA (Cytochrome b6-f complex subunit 5 n=5 Tax=Eukaryota TaxID=2759 RepID=PETG_CYAPA)

HSP 1 Score: 57.0 bits (136), Expect = 4.100e-10
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            M+EP+L G+VLGLIPVTLIGLF AA+ QYRRGN+
Sbjct:    1 MVEPLLSGIVLGLIPVTLIGLFVAAYLQYRRGNQ 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: A0A1C9CFS4_9FLOR (Cytochrome b6-f complex subunit 5 n=2 Tax=Hildenbrandia TaxID=31479 RepID=A0A1C9CFS4_9FLOR)

HSP 1 Score: 57.0 bits (136), Expect = 4.100e-10
Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNK 34
            MIEP+LFG+VLGLIP+TL+GLF AA+ Q+RR NK
Sbjct:    1 MIEPLLFGIVLGLIPITLLGLFVAAYLQFRRANK 34          
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Match: A0A2I4Q2V3_9PHAE (Cytochrome b6-f complex subunit 5 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2V3_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.100e-10
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    1 MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGN 33
            MIEP+LFG+VLG+IPVTLIGLF AAF QYRR N
Sbjct:    1 MIEPLLFGIVLGIIPVTLIGLFVAAFLQYRRQN 33          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5376.13579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J759_ECTSI3.620e-1391.18Cytochrome b6-f complex subunit 5 n=52 Tax=Phaeoph... [more]
A0A846FAW0_9CYAN4.970e-1182.35Cytochrome b6-f complex subunit 5 n=1 Tax=Cyanothe... [more]
PETG_GUITH1.000e-1079.41Cytochrome b6-f complex subunit 5 n=13 Tax=Eukaryo... [more]
B7T220_VAULI1.430e-1073.53Cytochrome b6-f complex subunit 5 n=1 Tax=Vaucheri... [more]
A0A651DUN7_9CYAN1.430e-1073.53Cytochrome b6-f complex subunit 5 n=1 Tax=Leptolyn... [more]
A0A7S6ZPA1_9STRA2.880e-1079.41Cytochrome b6-f complex subunit 5 n=1 Tax=Schizocl... [more]
A0A2Z5TJI6_9CYAN2.940e-1076.47Cytochrome b6-f complex subunit 5 n=1 Tax=cyanobac... [more]
PETG_CYAPA4.100e-1076.47Cytochrome b6-f complex subunit 5 n=5 Tax=Eukaryot... [more]
A0A1C9CFS4_9FLOR4.100e-1073.53Cytochrome b6-f complex subunit 5 n=2 Tax=Hildenbr... [more]
A0A2I4Q2V3_9PHAE4.100e-1081.82Cytochrome b6-f complex subunit 5 n=1 Tax=Dictyopt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003683Cytochrome b6/f complex, subunit 5PFAMPF02529PetGcoord: 1..34
e-value: 6.5E-21
score: 73.9
IPR003683Cytochrome b6/f complex, subunit 5PIRSFPIRSF000034Cytochrome_b6f_V/PetGcoord: 1..37
e-value: 1.1E-20
score: 70.6
IPR003683Cytochrome b6/f complex, subunit 5PANTHERPTHR35516FAMILY NOT NAMEDcoord: 1..34
IPR003683Cytochrome b6/f complex, subunit 5HAMAPMF_00432Cytb6_f_PetGcoord: 1..36
score: 16.563
NoneNo IPR availablePANTHERPTHR35516:SF2coord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR036099Cytochrome b6/f complex, subunit 5 superfamilySUPERFAMILY103446PetG subunit of the cytochrome b6f complexcoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5376contigL-elsbetiae_contig5376:7371..7487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5376.13579.1mRNA_L-elsbetiae_contig5376.13579.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5376 7371..7487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5376.13579.1 ID=prot_L-elsbetiae_contig5376.13579.1|Name=mRNA_L-elsbetiae_contig5376.13579.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=39bp
MIEPILFGMVLGLIPVTLIGLFAAAFFQYRRGNKDIII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003683Cyt_6/f_cplx_su5
IPR036099Cyt_6/f_cplx_su5_sf