prot_L-elsbetiae_contig5374.13573.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5374.13573.1
Unique Nameprot_L-elsbetiae_contig5374.13573.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length205
Homology
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BLAST of mRNA_L-elsbetiae_contig5374.13573.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.040e-61
Identity = 117/166 (70.48%), Postives = 124/166 (74.70%), Query Frame = 0 
Query:    1 MEMSSGEVERVAEGVESVVDLSGVSEAWEVWEMPLLIHPCYLLRRKGRTGGGS--------------GGWDDGSEGA----SEQFSVWCPAMRLDPCPPSVQRLLAPGR----GGEGGMAPSPVFSLDPGASCDPERVDLGLQPLLGTMVHASQAVCRPRVSNTPP 144
            MEMSSG V RVAEGVESVVDL+GVSEAWEVWEMPLL+HPCYLLRRKGR G                 G  DDG EG+    +E+FSVWCPAMRLDPCPPSVQRLL PGR    GG  GM PSPVFSLDPGASCDPERVDLGLQPLLGTMVHASQ      +S+ PP
Sbjct: 1013 MEMSSGMVRRVAEGVESVVDLTGVSEAWEVWEMPLLVHPCYLLRRKGRVGXXXXXXXXXXRRWEQRPGDGDDGDEGSEEEGTEEFSVWCPAMRLDPCPPSVQRLLTPGRATGSGGGHGMTPSPVFSLDPGASCDPERVDLGLQPLLGTMVHASQGGGPSSLSSLPP 1178
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BLAST of mRNA_L-elsbetiae_contig5374.13573.1 vs. uniprot
Match: A0A835YSR2_9STRA (RIC1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.190e-9
Identity = 46/119 (38.66%), Postives = 59/119 (49.58%), Query Frame = 0 
Query:   61 EGASEQFSVWCPAMRLDPCPPSVQRLLAPGRGGEGGM--APSPVFSLDPGASCDPERVDLGLQPLLGTMVHASQAVCRPR----------VSNTPP-----LPPCYEVRTHLRPILHMV 162
            E  SE++ VWCPA++L+         L  G   E  +        +LDP A  DPE + LGL    G MV     VCRPR          V+  PP     LPPCYE+RT LRP+LH++
Sbjct:  653 EAYSEEYQVWCPALQLE---------LPDGAFSEDSLDGGTDEALALDPHAYADPESMALGLLARKGAMV-----VCRPRDNAASAGSTAVNGPPPAEPLQLPPCYEMRTRLRPLLHLL 757
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5374.13573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB77_ECTSI1.040e-6170.48SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YSR2_9STRA5.190e-938.66RIC1 domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5374contigL-elsbetiae_contig5374:9117..12255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5374.13573.1mRNA_L-elsbetiae_contig5374.13573.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5374 9117..12255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5374.13573.1 ID=prot_L-elsbetiae_contig5374.13573.1|Name=mRNA_L-elsbetiae_contig5374.13573.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
MEMSSGEVERVAEGVESVVDLSGVSEAWEVWEMPLLIHPCYLLRRKGRTG
GGSGGWDDGSEGASEQFSVWCPAMRLDPCPPSVQRLLAPGRGGEGGMAPS
PVFSLDPGASCDPERVDLGLQPLLGTMVHASQAVCRPRVSNTPPLPPCYE
VRTHLRPILHMVLRHLLIASQLQLLDSPPPSPPPPPRWTLPLPLSASSPR
AKFPH
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