prot_L-elsbetiae_contig5365.13561.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5365.13561.1
Unique Nameprot_L-elsbetiae_contig5365.13561.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length129
Homology
BLAST of mRNA_L-elsbetiae_contig5365.13561.1 vs. uniprot
Match: D8LPR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR0_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.220e-38
Identity = 73/131 (55.73%), Postives = 94/131 (71.76%), Query Frame = 0
Query:    1 MAFHVLNAWEENVEVEGTANAVLKVVTCDLFEINLDLDKGKVDGEMPPGACPHTTTLNLDTGKVTRASITPQ--PPKEGLDFPQIRQTLVGKKNRYGFGFFTGFDRTGLPAAVVKLDLEVRSESTILVKSD 129
            M FHV+NAWEE VE  GTA  VLKVVTCD+FE++LD +    +  +   A P+TTTLNL+T K TRA + PQ  PP EGLDFPQIR++LVG+KNRYG+  F  FD  GL AA+VK+DL+   E+ ++ + D
Sbjct:  315 MTFHVVNAWEEQVEANGTATTVLKVVTCDMFELSLDQNDLNQETTVGQHARPYTTTLNLETSKATRACLVPQSQPPTEGLDFPQIRKSLVGRKNRYGY--FIAFDAGGLAAALVKIDLQATPETAVVGRID 443          
BLAST of mRNA_L-elsbetiae_contig5365.13561.1 vs. uniprot
Match: A0A6H5KGR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGR7_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.160e-22
Identity = 59/126 (46.83%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    2 AFHVLNAWEENVEVEG-------TANAVLKVVTCDLFEINLDLDKGK--VDGEMPPGACPHTTTLNLDTGKVTRASITPQPP-KEGLDFPQIRQTLVGKKNRYGFGFFTGFDRTGLPAAVVKLDLE 117
            AFHVLNAWEE +E  G         ++V+K+ TCD   ++LD  K    VD +  P    HT  L LDTG+V R S+ P+ P  EG+DFPQ+R++LVG+KNR  FG+ T F+  G  AA VK+DL+
Sbjct:   95 AFHVLNAWEETMEQTGGPGGVAPNTSSVIKIHTCDTKHLDLDFRKAAHGVDQDSLPFL--HTVILKLDTGEVIRHSVLPEKPFVEGMDFPQLRRSLVGRKNR--FGYCTTFNSKGDAAAEVKVDLQ 216          
BLAST of mRNA_L-elsbetiae_contig5365.13561.1 vs. uniprot
Match: D8LGA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA2_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.690e-22
Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    2 AFHVLNAWEENVEVEG-------TANAVLKVVTCDLFEINLDLDKGK--VDGEMPPGACPHTTTLNLDTGKVTRASITPQPP-KEGLDFPQIRQTLVGKKNRYGFGFFTGFDRTGLPAAVVKLDLE 117
            AFHVLNAWEE +E  G         ++V+K+ TCD   +++D  K    VD +  P    HT  LNLDTG+V R S+ P+ P  EG+DFPQ+R++LVG+KNR  FG+ T F+  G  AA +K+DL+
Sbjct:  316 AFHVLNAWEETMEQTGGPGGVAPNTSSVIKIHTCDTKHLDMDFRKAAHGVDQDSLPFL--HTVILNLDTGEVIRYSVLPEKPFSEGMDFPQLRRSLVGRKNR--FGYCTTFNSKGDAAAELKVDLQ 437          
BLAST of mRNA_L-elsbetiae_contig5365.13561.1 vs. uniprot
Match: A0A6H5KSQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ0_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 6.610e-22
Identity = 56/125 (44.80%), Postives = 75/125 (60.00%), Query Frame = 0
Query:    2 AFHVLNAWEENVEVEG-------TANAVLKVVTCDLFEINLDLDKGKVDGEMPPGACPHTTTLNLDTGKVTRASITPQPPK--EGLDFPQIRQTLVGKKNRYGFGFFTGFDRTGLPAAVVKLDLE 117
            A HVLNAWEE +E  G       T  +V+K+ TCD+  + +D  K  +  +    A  HT TLNLDTG+VTR S+ P      +G+DFPQIR++LVG+KNR  FG+ T  D  G   A  K+DL+
Sbjct:  328 ALHVLNAWEETMEKTGGPGGVAPTKTSVIKIHTCDISRLTMDFRKLSLGVDQDELAILHTVTLNLDTGEVTRESVLPSSSTLLQGMDFPQIRRSLVGRKNR--FGYCTIMDMKGDAIAEAKIDLQ 450          
BLAST of mRNA_L-elsbetiae_contig5365.13561.1 vs. uniprot
Match: D8LGA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA3_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.280e-21
Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 0
Query:    2 AFHVLNAWEENVEVEG-------TANAVLKVVTCDLFEINLDLDKGKVDGEMPPGACPHTTTLNLDTGKVTRASITPQPP--KEGLDFPQIRQTLVGKKNRYGFGFFTGFDRTGLPAAVVKLDLE 117
            A HVLNAWEE +E  G       T  +V+K+ TCD+  + +D  K     +    A  HT TLNLDTG+VTR S+ P      EG+DFPQ+R++LVG+KNR  FG+ T  D  G   A  K+DL+
Sbjct:  316 ALHVLNAWEETMEKTGGPAGIAPTKTSVIKIHTCDISRLTMDFRKLSHGVDQDELAILHTVTLNLDTGEVTRESVLPSSRTLSEGMDFPQLRRSLVGRKNR--FGYCTVMDMKGDAIAEAKIDLQ 438          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5365.13561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPR0_ECTSI1.220e-3855.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGR7_9PHAE1.160e-2246.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGA2_ECTSI3.690e-2246.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSQ0_9PHAE6.610e-2244.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGA3_ECTSI1.280e-2144.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004294Carotenoid oxygenasePFAMPF03055RPE65coord: 1..119
e-value: 1.2E-10
score: 41.2
IPR004294Carotenoid oxygenasePANTHERPTHR10543BETA-CAROTENE DIOXYGENASEcoord: 1..121
NoneNo IPR availablePANTHERPTHR10543:SF89CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1coord: 1..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5365contigL-elsbetiae_contig5365:10661..12342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5365.13561.1mRNA_L-elsbetiae_contig5365.13561.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5365 10655..12342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5365.13561.1 ID=prot_L-elsbetiae_contig5365.13561.1|Name=mRNA_L-elsbetiae_contig5365.13561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp
MAFHVLNAWEENVEVEGTANAVLKVVTCDLFEINLDLDKGKVDGEMPPGA
CPHTTTLNLDTGKVTRASITPQPPKEGLDFPQIRQTLVGKKNRYGFGFFT
GFDRTGLPAAVVKLDLEVRSESTILVKSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004294Carotenoid_Oase