prot_L-elsbetiae_contig536.13547.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig536.13547.1
Unique Name	prot_L-elsbetiae_contig536.13547.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	146

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: D7G8N0_ECTSI (50S ribosomal protein L24, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N0_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 5.810e-91
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEK+NVRSLPVR GDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDR ALL RKDR+RNGGKPAAG ADADVNMAGVD
Sbjct:   27 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKYNVRSLPVRAGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRVALLARKDRSRNGGKPAAGAADADVNMAGVD 171

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A835YVZ0_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ0_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.800e-63
Identity = 105/145 (72.41%), Postives = 119/145 (82.07%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MK+NPNV+SSRRKSRKAHF A S  RR++MSA LSK+L  K+NVRS+PVRK DEVMVVRG YKNREGKV  CYRRK+VIHIER+TREKANG TV +GIHPSKV ITK+K+DKDRK LLERK R    G  A   ++ DVNMAGVD
Sbjct:    1 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAG-AAKKASEKDVNMAGVD 144

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A451FLG4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Eustigmatophyceae sp. Mont 10/10-1w TaxID=2506145 RepID=A0A451FLG4_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.380e-58
Identity = 100/145 (68.97%), Postives = 115/145 (79.31%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MK NPNV+SSRRKSRKAHF A S  RRVLMSA LSKDL  K+ VRS+P+RK DEV VVRG +KN +GKV   YR+KFVIHI+RITREKANG TV+VGIHPSKV ITK+KM+K RKA+LERK R  +  K      +ADVN+AGVD
Sbjct:    1 MKFNPNVSSSRRKSRKAHFSAPSHMRRVLMSAPLSKDLQAKYKVRSMPIRKEDEVTVVRGRHKNSDGKVTQVYRKKFVIHIDRITREKANGATVNVGIHPSKVVITKLKMNKSRKAILERKARKSDADKAKGKFTEADVNLAGVD 145

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A7S2C9Q4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9Q4_9STRA)

HSP 1 Score: 185 bits (470), Expect = 7.230e-58
Identity = 94/145 (64.83%), Postives = 119/145 (82.07%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MK +PNV+S R KSRKAHF A S  +R +MSA LSKDL  K+NVRS+P+RK DEVMVVRG++KNREGKV   YR+K+VIHIER++R+KANG  V++GIHPS   ITK+K+DKDRK +L+RKDR+++  K   G++DADVNMAGVD
Sbjct:    1 MKFSPNVSSDRNKSRKAHFTASSSQKRKIMSASLSKDLVSKYNVRSMPIRKDDEVMVVRGSHKNREGKVIQVYRKKYVIHIERVSRDKANGAPVNIGIHPSNCVITKLKLDKDRKNILDRKDRSKDSSK---GLSDADVNMAGVD 142

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A3R5U3L5_9STRA (50S ribosomal protein L24, chloroplastic n=4 Tax=Eustigmatophyceae TaxID=5747 RepID=A0A3R5U3L5_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.220e-58
Identity = 96/145 (66.21%), Postives = 117/145 (80.69%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            +K NPNV+SSRRKSRK HF A S  RR++MSA LSKDL  K+ VRS+P+RK DEV VVRG++KNR+GKV   YR+KFVIHI+R+TREKANG TV+VGIHPSKV ITK+K++K RKA+LERK RT    K    + +ADVN+AGVD
Sbjct:    2 VKFNPNVSSSRRKSRKQHFTAPSHVRRIIMSAPLSKDLRAKYKVRSIPIRKEDEVTVVRGSFKNRDGKVTQVYRKKFVIHIDRVTREKANGATVNVGIHPSKVIITKLKLNKSRKAILERKARTSAADKNKGKLTEADVNLAGVD 146

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A7J6P5Z0_PEROL (60S ribosomal protein L26 n=7 Tax=Alveolata TaxID=33630 RepID=A0A7J6P5Z0_PEROL)

HSP 1 Score: 184 bits (468), Expect = 1.500e-57
Identity = 96/145 (66.21%), Postives = 119/145 (82.07%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MK +P V+SSRRKSRKAHF A S+ RR++MSA LSK+L  K+NVRS+P+RK DEVMVVRG Y +REGKV  CYR+KFVIHIER+TR+K NG+  +VG+HPSKV ITK+KMDKDRKALLERK+R+++ GK +    + DV MA VD
Sbjct:    1 MKFSPAVSSSRRKSRKAHFTAPSDQRRIIMSAPLSKELRAKYNVRSVPIRKDDEVMVVRGHYSDREGKVTACYRKKFVIHIERLTRDKVNGSHANVGVHPSKVVITKLKMDKDRKALLERKNRSKDSGKKS--YTEKDVAMAQVD 143

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: T0Q9Y6_SAPDV (50S ribosomal protein L24, chloroplastic n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q9Y6_SAPDV)

HSP 1 Score: 183 bits (465), Expect = 4.450e-57
Identity = 96/145 (66.21%), Postives = 112/145 (77.24%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MK N  V SSRRK RKAHFGAHS  RRVLMSA LSKDL  K+NVRS+P+RK DEV +VRG++KNREG+V  CYR+KFVIH+ER+ +EK NG  V VGIHPSKV ITK+K+DKDRK +LERK+R   G K      +ADV MA VD
Sbjct:    1 MKFNSTVTSSRRKCRKAHFGAHSTQRRVLMSANLSKDLQSKYNVRSMPIRKDDEVTIVRGSFKNREGRVTQCYRKKFVIHVERVVKEKVNGAAVPVGIHPSKVVITKLKLDKDRKKILERKNRAV-GDKNKGKFTEADVAMANVD 144

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A7S2V566_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V566_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.310e-56
Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MK+   V+SSRRKSRKAHF AHS ARRV+MSA LSKDL  K+NVRS+P+RK DEV V RG +KNREGKV  CYR+K+V+H+ER T+EK NG  VHVGI PS V ITK+K+DK+RKA+LERKDR +   K      + DVNM  VD
Sbjct:    1 MKVKNTVSSSRRKSRKAHFSAHSTARRVIMSAPLSKDLQAKYNVRSMPIRKDDEVQVTRGYFKNREGKVVQCYRKKYVVHVERCTKEKTNGAQVHVGIAPSNVVITKLKLDKNRKAILERKDRAKGAEKGKGKYTETDVNMGNVD 145

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A7S3LFZ3_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LFZ3_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.400e-56
Identity = 96/145 (66.21%), Postives = 113/145 (77.93%), Query Frame = 0

Query:    1 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            MK NPNV+S+RRKSRKAHFG+HS ARR LMSA LSK+L EK+NVRSLP+RK DEV + RG +KNREGKV   YR+KFVIH+ER+ R+KANG     GIHPSKV ITKIK+DKDRKALL+RK++     K      DADV M+ VD
Sbjct:    1 MKFNPNVSSARRKSRKAHFGSHSTARRKLMSAPLSKELQEKYNVRSLPIRKDDEVTIARGTFKNREGKVIQVYRKKFVIHVERVLRDKANGGNFPAGIHPSKVIITKIKLDKDRKALLDRKNKLE---KDKGKFTDADVAMSNVD 142

[Close]

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Match: A0A1V9ZGA6_9STRA (50S ribosomal protein L24, chloroplastic n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGA6_9STRA)

HSP 1 Score: 181 bits (459), Expect = 5.700e-56
Identity = 95/144 (65.97%), Postives = 111/144 (77.08%), Query Frame = 0

Query:    2 KLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD 145
            K N  V SSRRK RKAHFGAHS  RRVLMSA LSKDL  K+NVRS+P+RK DEV +VRG++KNREG+V  CYR+KFVIH+ER+ +EK NG  V VGIHPSKV ITK+K+DKDRK +LERK+R   G K      +ADV MA VD
Sbjct:   16 KFNSTVTSSRRKCRKAHFGAHSTQRRVLMSANLSKDLQAKYNVRSMPIRKDDEVTIVRGSFKNREGRVTQCYRKKFVIHVERVVKEKVNGAAVPVGIHPSKVVITKLKLDKDRKKILERKNRAI-GDKNKGKFTEADVAMANVD 158

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig536.13547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8N0_ECTSI	5.810e-91	95.86	50S ribosomal protein L24, chloroplastic n=2 Tax=E...	[more]
A0A835YVZ0_9STRA	1.800e-63	72.41	50S ribosomal protein L24, chloroplastic n=1 Tax=T...	[more]
A0A451FLG4_9STRA	1.380e-58	68.97	50S ribosomal protein L24, chloroplastic n=1 Tax=E...	[more]
A0A7S2C9Q4_9STRA	7.230e-58	64.83	50S ribosomal protein L24, chloroplastic n=1 Tax=F...	[more]
A0A3R5U3L5_9STRA	8.220e-58	66.21	50S ribosomal protein L24, chloroplastic n=4 Tax=E...	[more]
A0A7J6P5Z0_PEROL	1.500e-57	66.21	60S ribosomal protein L26 n=7 Tax=Alveolata TaxID=...	[more]
T0Q9Y6_SAPDV	4.450e-57	66.21	50S ribosomal protein L24, chloroplastic n=4 Tax=S...	[more]
A0A7S2V566_9STRA	1.310e-56	64.14	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S3LFZ3_9STRA	2.400e-56	66.21	50S ribosomal protein L24, chloroplastic n=1 Tax=A...	[more]
A0A1V9ZGA6_9STRA	5.700e-56	65.97	50S ribosomal protein L24, chloroplastic n=2 Tax=A...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005824	KOW	SMART	SM00739	kow_9	coord: 48..75 e-value: 8.5E-6 score: 35.3
IPR005824	KOW	PFAM	PF00467	KOW	coord: 51..82 e-value: 1.4E-6 score: 28.1
IPR005756	Ribosomal protein L26/L24, eukaryotic/archaeal	PFAM	PF16906	Ribosomal_L26	coord: 9..121 e-value: 4.6E-36 score: 123.5
IPR005756	Ribosomal protein L26/L24, eukaryotic/archaeal	TIGRFAM	TIGR01080	TIGR01080	coord: 9..121 e-value: 1.1E-43 score: 146.3
IPR005756	Ribosomal protein L26/L24, eukaryotic/archaeal	PANTHER	PTHR11143	60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER	coord: 1..127
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..140 e-value: 1.4E-50 score: 172.9
IPR005825	Ribosomal protein L24/L26, conserved site	PROSITE	PS01108	RIBOSOMAL_L24	coord: 52..69
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 9..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig536	contig	L-elsbetiae_contig536:5819..10806 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig536.13547.1	mRNA_L-elsbetiae_contig536.13547.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig536 5780..11745 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig536.13547.1 ID=prot_L-elsbetiae_contig536.13547.1|Name=mRNA_L-elsbetiae_contig536.13547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp
MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVR
KGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHP
SKVQITKIKMDKDRKALLERKDRTRNGGKPAAGVADADVNMAGVD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005824	KOW
IPR005756	Ribosomal_L26/L24P_euk/arc
IPR014722	Rib_L2_dom2
IPR005825	Ribosomal_L24/26_CS
IPR008991	Translation_prot_SH3-like_sf