prot_L-elsbetiae_contig5355.13538.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5355.13538.1
Unique Nameprot_L-elsbetiae_contig5355.13538.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 2.240e-33
Identity = 70/127 (55.12%), Postives = 78/127 (61.42%), Query Frame = 0
Query:    1 MVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL-----------------------------------------ITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 86
            MVHK+RNELVTRH+PEGR TVF+RL KL++PDTLMP+                                         ITEE+L  MRSGCTIDGVRYKGMFVRV  GGGKG  GRNAWLTI+CTEG
Sbjct:  196 MVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEG 322          
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 5.820e-16
Identity = 36/41 (87.80%), Postives = 37/41 (90.24%), Query Frame = 0
Query:   46 MRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 86
            MRSGCTIDGVRYKGMFVRV  GGGKG  GRNAWLTI+CTEG
Sbjct:    1 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEG 41          
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5J9J6_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J6_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.280e-10
Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 MVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL 37
            MVHK+RNELVTR +PEGR TVF+RLAKL++PDTLMP+
Sbjct:  214 MVHKMRNELVTRDDPEGRPTVFDRLAKLKLPDTLMPV 250          
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A7S2KG34_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KG34_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.670e-5
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   38 ITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 86
            +T  +LS +R G  I+GVRYKGM VR+   G    GG N WL IKCTEG
Sbjct:  199 LTFGKLSAIRRGVEINGVRYKGMDVRIE--GNLKKGGTNTWLQIKCTEG 245          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LDE8_ECTSI2.240e-3355.12RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J790_9PHAE5.820e-1687.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9J6_9PHAE2.280e-1078.38S4 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S2KG34_9STRA1.670e-555.10Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5355contigL-elsbetiae_contig5355:7292..8351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5355.13538.1mRNA_L-elsbetiae_contig5355.13538.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5355 1543..8825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5355.13538.1 ID=prot_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
MVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPLITEEELSGMRSGC
TIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG*
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