prot_L-elsbetiae_contig5352.13534.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5352.13534.1
Unique Nameprot_L-elsbetiae_contig5352.13534.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length149
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 7.140e-93
Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 148
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV+GAG+GGGCC
Sbjct:   62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 203
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.020e-76
Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGG-GCC 148
            WDTAGQERFRTIT+SYYRGAHGIIVVYDVTD+ESFNNVKQWL EI+RYACENVNKLLVGNKSDLEAKRAVTTEE K FAD++GIEFLETSAKNA NVEKAF+MM+ QIK RMK+ P G  +GGTRLTA  QV G GAGG GCC
Sbjct:   62 WDTAGQERFRTITASYYRGAHGIIVVYDVTDRESFNNVKQWLTEIERYACENVNKLLVGNKSDLEAKRAVTTEEGKEFADSIGIEFLETSAKNADNVEKAFLMMSQQIKGRMKTAPAGGAKGGTRLTAGEQVGGGGAGGSGCC 204
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A836CKR4_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR4_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.980e-76
Identity = 116/142 (81.69%), Postives = 127/142 (89.44%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 148
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD++SF NVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAK FAD+LGIEFLETSAKNA+NV+ AFM M++ IK RMK+QPT   +GGT+LT S QV+G    GGCC
Sbjct:   62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDSFQNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKEFADSLGIEFLETSAKNATNVDSAFMTMSAAIKGRMKTQPTAGAKGGTKLTPSAQVSGGATSGGCC 203
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: W7TST3_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST3_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.670e-74
Identity = 116/142 (81.69%), Postives = 126/142 (88.73%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 148
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEI+RYA ENVNKLLVGNKSDLE KR V+TE AK FAD+LGI FLETSAKN++NVEKAF+ MASQIK+RMK+QP G   GGT+LTAST V G GA  GCC
Sbjct:   62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEINRYASENVNKLLVGNKSDLEPKRVVSTETAKEFADSLGIAFLETSAKNSTNVEKAFLTMASQIKARMKTQPVGPKTGGTKLTASTAVGGPGASSGCC 203
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A812YRD8_SYMMI (RAB1A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YRD8_SYMMI)

HSP 1 Score: 218 bits (556), Expect = 1.070e-70
Identity = 116/144 (80.56%), Postives = 127/144 (88.19%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQP--TGAPRGGTRLTASTQVNGAGAGGGCC 148
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD ESFNNVKQWLHEIDRYA ENVNKLLVGNKSDL +KRAVT E+ K FAD+LGIEFLETSAKNA+NVEKAFM MA+QIKSRMK+QP  + AP+G T+LTA + V+G    GGCC
Sbjct:   17 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLHEIDRYASENVNKLLVGNKSDLTSKRAVTFEQGKEFADSLGIEFLETSAKNATNVEKAFMTMAAQIKSRMKAQPANSAAPKG-TKLTAGSAVSGGN--GGCC 157
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycota TaxID=4762 RepID=YPT1_PHYIN)

HSP 1 Score: 214 bits (546), Expect = 1.510e-68
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 148
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV   G G  CC
Sbjct:   62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQVPSNG-GSKCC 201
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD)

HSP 1 Score: 214 bits (545), Expect = 2.140e-68
Identity = 113/142 (79.58%), Postives = 122/142 (85.92%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 148
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+TE AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + PT AP+   +L   T V   G GG CC
Sbjct:   62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTEAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPT-APKPTLKLNQGTNVQQNG-GGKCC 201
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A140YWP8_PHYNI (Ras-related protein (Fragment) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A140YWP8_PHYNI)

HSP 1 Score: 213 bits (542), Expect = 5.040e-68
Identity = 107/132 (81.06%), Postives = 118/132 (89.39%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 138
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSA+NA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV
Sbjct:   57 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSARNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 187
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A140YWQ0_PHYNI (Ras-related protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A140YWQ0_PHYNI)

HSP 1 Score: 212 bits (539), Expect = 1.440e-67
Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 138
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ A+ FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  APR G +LT    V
Sbjct:   57 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAQEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APRAGVKLTPGQHV 187
[Close]
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A6A3UIH2_9STRA (Ras-like GTP-binding protein n=90 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UIH2_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.960e-67
Identity = 108/132 (81.82%), Postives = 118/132 (89.39%), Query Frame = 0 
Query:    7 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 138
            WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  AP+ G +LT   QV
Sbjct:   62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 192
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNV2_ECTSI7.140e-9398.59Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YQS3_9STRA1.020e-7683.22Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
A0A836CKR4_9STRA1.980e-7681.69Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
W7TST3_9STRA2.670e-7481.69Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A812YRD8_SYMMI1.070e-7080.56RAB1A protein n=1 Tax=Symbiodinium microadriaticum... [more]
YPT1_PHYIN1.510e-6878.87Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycot... [more]
K3W769_GLOUD2.140e-6879.58Uncharacterized protein n=4 Tax=Oomycota TaxID=476... [more]
A0A140YWP8_PHYNI5.040e-6881.06Ras-related protein (Fragment) n=4 Tax=Peronospora... [more]
A0A140YWQ0_PHYNI1.440e-6781.06Ras-related protein (Fragment) n=4 Tax=Phytophthor... [more]
A0A6A3UIH2_9STRA1.960e-6781.82Ras-like GTP-binding protein n=90 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 57..70
score: 55.32
coord: 92..114
score: 43.84
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..117
e-value: 2.1E-6
score: -36.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..117
e-value: 4.6E-47
score: 172.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 2..117
e-value: 5.9E-10
score: 26.1
NoneNo IPR availableGENE3D3.40.50.300coord: 3..129
e-value: 4.5E-48
score: 165.1
NoneNo IPR availablePANTHERPTHR24073:SF1046RAS-RELATED PROTEIN RABD2Acoord: 6..121
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 6..121
NoneNo IPR availablePROSITEPS51419RABcoord: 1..148
score: 25.591
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 7..110
e-value: 4.1E-19
score: 66.9
IPR001806Small GTPasePFAMPF00071Rascoord: 7..115
e-value: 1.0E-42
score: 145.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5352contigL-elsbetiae_contig5352:149..2038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5352.13534.1mRNA_L-elsbetiae_contig5352.13534.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5352 149..2038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5352.13534.1 ID=prot_L-elsbetiae_contig5352.13534.1|Name=mRNA_L-elsbetiae_contig5352.13534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp
MHFLLQWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHE
IDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNA
SNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase