prot_L-elsbetiae_contig535.13530.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig535.13530.1
Unique Nameprot_L-elsbetiae_contig535.13530.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length107
Homology
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BLAST of mRNA_L-elsbetiae_contig535.13530.1 vs. uniprot
Match: D7G080_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G080_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 5.860e-7
Identity = 31/56 (55.36%), Postives = 34/56 (60.71%), Query Frame = 0 
Query:   23 AAAASAWDPGNVVYVGMEYSNMGACSQKAPAS---FQPGNFAG---GCSQNKMAVP 72
            A AA  WD  +V YVGMEYSN GACSQK  A+   +  G  A    GCSQNK A P
Sbjct:   22 ATAAVPWDSDSVAYVGMEYSNKGACSQKRSAAVDFYGGGGTASTGRGCSQNKAAAP 77
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig535.13530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G080_ECTSI5.860e-755.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig535contigL-elsbetiae_contig535:33102..33742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig535.13530.1mRNA_L-elsbetiae_contig535.13530.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig535 33102..33742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig535.13530.1 ID=prot_L-elsbetiae_contig535.13530.1|Name=mRNA_L-elsbetiae_contig535.13530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
MYTSQPSSSGSGTPQHGQFHHQAAAASAWDPGNVVYVGMEYSNMGACSQK
APASFQPGNFAGGCSQNKMAVPVGTTSAGIVGVGYPFPYTHAGNYGISGA
AYGVGSG
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