prot_L-elsbetiae_contig5346.13524.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5346.13524.1
Unique Nameprot_L-elsbetiae_contig5346.13524.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length592
Homology
BLAST of mRNA_L-elsbetiae_contig5346.13524.1 vs. uniprot
Match: A0A6H5K8W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W8_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 2.250e-69
Identity = 232/630 (36.83%), Postives = 276/630 (43.81%), Query Frame = 0
Query:    1 HEDEAPPLACQFNHRGTHLAVGDESGRVDLWSFVPLRQFVKSLGLTPETLDRLLPPAPYTESANGGWGWVGLGWFGSRVCSLRRGQAAAAKDKEKGDIDHGWSTTSVHW--CSRYVLAAYVQKRKTWPDGEGVLLPGLVVLWSVVEGQVEGYLRFASRVAHVSLSPMDPRRGSVCCADGTAFIA----AXXXXXXXXXXXXXXXXXXXXXXXAPPVAGSPREGEGEAEDGTRWPRAEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGAKDAAVDG-MDVEDAGSCXXXXXXXXXXXXXXXXXXXXXXXXDGSXXXXXGGXXXXXXSSDXXXXXXXXXXXXXXXXXXSAR----------AAEVLKIWDKDPAWRLELFSSGTEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDS-----SXXXSEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKIPLQPCRVAWGADGETLFLINHEAGS----LLKIGAPSIGP------------QQSATLSLLARADPHGGASPATLQLSPDGDSLLVSTATMGLCLVPTEDLDLTRARMFGE 592
            HE++A PL CQFN RGTH AVGDE+GRVDLWSFVP+R +VKSL L+ + LD++ PPA  T SA+       +    + V S + G  AAAKD+E  D+DHGWSTTSV W  CSRY++AAYVQKRKTWPDGE VLLPGLV+LW +VE +VEG LR  SR+ H SLSP +PR GSVCCADG++F+A    A      XXXXXXXXX        A PV  +P  G    E              XXXXXXX                                             +G  D A DG MDVED                            D               S++                                A++ KIWD       ELFS+ T                                  S     S   S                                                    XXXXXXXX    +Q  RVAW  DGET FL+NHE G+    LL +   ++              Q   +LSLLARADP GGASPATLQL+PDGD +L++TAT GLCLVPTEDLDL +A  FGE
Sbjct:   62 HENDAAPLTCQFNRRGTHFAVGDEAGRVDLWSFVPIRMYVKSLELSHDLLDKIFPPA--TLSADSA-----VTTPAAAVASEKSGARAAAKDRE--DVDHGWSTTSVGWSRCSRYMVAAYVQKRKTWPDGEEVLLPGLVLLWDIVEEEVEGCLRLPSRIVHASLSPSNPRCGSVCCADGSSFLADFPSAATTANAXXXXXXXXXNCGTQDDAATPVQ-TPGVGSSFGEXXXXXXXXX-----XXXXXXXPQEVDEDDCTSDARAKSPGAEGTTISEGTGGVSRAYGRAAVTVAGNGEMDDADDGAMDVEDEKEARGESEARTNVSSNNTGSTGSCYAEDTKSSSGCAAEVEAVSSAETGTGAGVGGGAPADGHVSVGHNRGNTVGRVGVAKLRKIWDPAVQRVEELFSATTTAITAAASIVCERSATSGSGSISGESVDGSISSSSKVISGSDSMSRSGSSVRGGKGEVETDAARKEAHLSSSSSPPLPSPSYVGGTAFSSVSGGTSSXXXXXXXXXXAAIQAGRVAWCDDGETFFLLNHEGGAWSLKLLAVAVAALNDVVVVGNLLKIKTQSDGSLSLLARADPQGGASPATLQLAPDGDKVLIATATRGLCLVPTEDLDLVKAEPFGE 676          
BLAST of mRNA_L-elsbetiae_contig5346.13524.1 vs. uniprot
Match: D7FSY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY9_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 3.040e-23
Identity = 63/94 (67.02%), Postives = 72/94 (76.60%), Query Frame = 0
Query:  499 LQPCRVAWGADGETLFLINHEAGSLLKIGAPSIGPQQSATLSLLARADPHGGASPATLQLSPDGDSLLVSTATMGLCLVPTEDLDLTRARMFGE 592
            +Q  RVAW  DGET FL+NHE G+LLKI     G     +LSLLARADP GGASPATLQL+PDGD +L++TAT GLCLVPTEDLDL +A  FGE
Sbjct:  247 IQAGRVAWCDDGETFFLLNHE-GNLLKIKTHCDG-----SLSLLARADPQGGASPATLQLAPDGDKVLIATATRGLCLVPTEDLDLVKAEPFGE 334          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5346.13524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8W8_9PHAE2.250e-6936.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSY9_ECTSI3.040e-2367.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY101908Putative isomerase YbhEcoord: 5..575

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5346contigL-elsbetiae_contig5346:1316..11819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5346.13524.1mRNA_L-elsbetiae_contig5346.13524.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5346 1316..11819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5346.13524.1 ID=prot_L-elsbetiae_contig5346.13524.1|Name=mRNA_L-elsbetiae_contig5346.13524.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=592bp
HEDEAPPLACQFNHRGTHLAVGDESGRVDLWSFVPLRQFVKSLGLTPETL
DRLLPPAPYTESANGGWGWVGLGWFGSRVCSLRRGQAAAAKDKEKGDIDH
GWSTTSVHWCSRYVLAAYVQKRKTWPDGEGVLLPGLVVLWSVVEGQVEGY
LRFASRVAHVSLSPMDPRRGSVCCADGTAFIAAFPAAAPAAVVVGAAAGA
AAGAAAAPPVAGSPREGEGEAEDGTRWPRAEGGSGGGGGGSGGEEAAVVL
GTAAAAAAAVGGGNGGGGISSPANGGGGGGGGGGGGLSDGAKDAAVDGMD
VEDAGSCGGGSGGLSGGGQEATGDGMDVENADGSGGGGGGGGGGGGGSSD
GDEDAAGDRTGVENADGSSARAAEVLKIWDKDPAWRLELFSSGTEPPPPP
RPPAFTNTGSGSGSGGGCSSSSSSGAGDSSGNGSEPGSSSGNGSGNSTTA
TARTTATATATATPPSPPPTTATTIAITTATGLPTGLPTGLTTGSKIPLQ
PCRVAWGADGETLFLINHEAGSLLKIGAPSIGPQQSATLSLLARADPHGG
ASPATLQLSPDGDSLLVSTATMGLCLVPTEDLDLTRARMFGE
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