prot_L-elsbetiae_contig5335.13503.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5335.13503.1
Unique Nameprot_L-elsbetiae_contig5335.13503.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1468
Homology
BLAST of mRNA_L-elsbetiae_contig5335.13503.1 vs. uniprot
Match: A0A6H5J8B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B5_9PHAE)

HSP 1 Score: 533 bits (1374), Expect = 8.720e-160
Identity = 585/1557 (37.57%), Postives = 731/1557 (46.95%), Query Frame = 0
Query:   14 SARKQFRSWRRQGSPAPHPAVTDGVVCHHEPPEGRAHHPHSPTPV--ASVPWAPRPVGLNSAEHRRASFRGRPSSPVGAVCTWKAGAGSTEKRVRSSNSGSSGSRSSLRNSRDEGFRGKGSTQGKPAAMGHVKTAIDSGVAIERSDTPGSGKAVR-----EQSRDERWGNLPPELRAIKDRWLGESSEEIEPQPAVSDAVPSTFAAGSTPPRGDRQ----YKQVARSEADPPDRDARLEGPYSSARGPPFHDAQGSRTGAKGLVPGKTAGEEEERRQGC-QDGTCASRYDIRRGGVSVDCSERSHARRHMIRDAPETQGRDMLRTKGLSEADEQSDRHPHPSPVAESTAVH---QDLRCSG-AGREARCPQSGEVLNARALGD-QGGEGGGRGEPAQNTNVPGIRQEEELDVSMAPAFGGALEAPGGTHRRDKVRNQLRALRSRLPRSATGEIPPAVSPTLLRGGERFVPPSREECQTSARIQ-PSSNTRAPS--EADEAGDVGQGRDRQRSNGRAGATGAGGTGRRLATPAAMVPPVMVHE--APGQAAGGKLRMGSTLLENDER--VGAESKRPNAATVQADVAVLAEGVSTDRVGGRSTGETTSASSRPSELFDSLDLSASAPHNGGVLAT---------GAPA---AAQPAPRTAAATYQT--SPFQSVKGL-----EHA-NFPN-RTVVAVAAPTTLEMPPPSLSQGGPPGKATSVELIACVPRSQTNQASREAP------IKLRLPERAPESPKMAPRRTAKATPGAQRNSESRDVTCVSRLRAPGWGREATITAIPPASTAAGEAEAGTRHHAAAAV--AAPADAALLPWDLLTPVTEAATVDEHSAVSRGTRGTSRMTPASSDVSGSGPPDQGEGAGAVRSRFHRRSPQSLRAE--PHRGAA-------------SGPAADRNGHGRQKRAMWGSGGVVSSGGGGSGSGAHSAPCKSTARPKRMSAIPSAGALSSQSGYRSSPLSGAGDRVGARGSTFSSASEETRPGRQAGGGYVAAMGRRARSIARCEAARRQAVATMVAKRARPSTPISERARWGKGRESQ-----------------------QEDATALARRKCVAATPA-MLPADPRHVRAVAVG-------HDSPSCDAGARAGAREGSAPRATGARTNRDSARCDTPVVDGR--DRGSRVLPDSPALSRAVSRNGQGRRGXXXXXXERGVTHRRQKPDARFTPDHQSTGEGEEERLMASIARLDTLLHEESGGATANASRKIPYSPRSGVGVRTDPSKSGGETEQKAVVRVPAVGIAKSRVRNGGGKE-TKTCRPLGVSPTMAPKLGANHGVSMPAAIGV---ANDYADGTVPSGPGMFPPLFSRVPACPSERRERGRCAPSDADEMRTNSPMVEAAISHVPASHVPGTR--------HVTGREQQWTGRRDYGPREAMPGQYHPPHDNSQPAVSSRRVADIISRGGDVARG---MGARRQEEWVQRVPCSPGRYRDTRHGD-SPRGWHGYHGGEREFY--SDRAAASDPRDVWGDVRTERRDWAGEPRPD 1451
            S RK  RSWR+QGSPAP   V D  V  H+P +    +    TPV   +   A  P  L S     A+      + VGA CT +      E+   +  +G S        +R E         G+   +    TA+     +  SD    G AV      EQSR  RW NLPPELRAIKDRWLG SSEEI PQ A SD   S  A  +TP  G RQ    Y Q  RS   P D+D R   P     G   HD  G   GA+   P +T  E +++  GC +D T  +        +S D  E S    + ++     +GRD    + L +AD +S +        +   +H    D    G + R+   P+  + L  R     Q G+  G  E A   ++     EE     +    G A+  P    RR KVRNQLR LR+RL   ATGE+P A SP  +   +  +P  +     SAR Q P      P   EA++ GD G+ RD   + G       GG    L  PA +V  V  H      Q     L +    L+  ER   G +         ++DVA + EG S   +      +TT+  SRPSELFDSLD+SA A   GG L           GAPA    A+ AP T   T Q   SP ++ K       +HA N  N  T+ A+   T       +     PP +     LI  VP   T   +R         + +  P RA +SP   P R +   P      + R+    SRLRAPGWGREA ITAI PA    G A+ G+     A+   AAP D A+LPWDLLTP+TEAATVDE S VS GT GT++MTPASS  SG  PP + E + A++ R +RR P  L+A+  P+  AA             SG    RN +G +KRA+WGSG V S        GAHSAP  ++AR +R  A P+ GAL+S S YR+SPLS   D VG  GS FSSAS ET PGRQ GGGYVAAMGRRARS+ARCEAARR A A M A R RPSTPISERARWGKG+ESQ                       +E+A  LARRKC+AA  + MLPADPRHVRA A          +S   DA    G  +G  P A  A    D  R +   +DGR  D+   + P S   S   SR     R       + G  HRRQK   +              RL ASIARLDTLL E  G     ASR+   +P  G       SKS G  E ++  R P  GIAK+RVR G  K  T +  PL     + P+ G+   VS+ AA+ V   A   A   + + PG+FP +F RVPA     RE GR  P DA +          A    PASH P +R        +    EQ+   R D GP +A PG Y      S  AVS R V D   R    AR      A+R+E WV + PCSP RYR     D + RGWH +  G R +Y   D  AA DPRD  G V   R  W GE RP+
Sbjct:   76 SVRKNIRSWRKQGSPAP---VGDNTV--HKPAQPWEQNNRGGTPVLFGTGQSATSPAKLTSTRQGNANVNWTLGNSVGAACTLE------EREDAAEMTGISAW------TRHE-------AAGRVETISPKLTAVIDRSYLVSSDVGVDGGAVAGRDSGEQSRGGRWANLPPELRAIKDRWLGSSSEEITPQTATSDIAVSPGATITTPAHGGRQDQHSYFQEYRSRVVPRDKDVRYAHPNILVEGSAPHDNHGRLEGAQTKTPSETVDERKKQGHGCGEDSTFRT--------ISSDSLECSRLVENGLQVTRSAEGRDAHHPR-LRQADAESLKDSPQRQHQQQGLLHPIANDNELLGQSSRDDVTPRGSDELGDRTPPHTQEGKDSGLAEDAAAPSI-----EEWCGEILPLQPGEAVGDPKDGGRRAKVRNQLRDLRNRLTNGATGELPTAASPKPVNVNDALLPAQQATSPASARTQQPWKGGAQPGAGEAEQVGDDGRRRDVHINLG----DNKGGAQDTL-RPATLVQRVPSHGEGTVNQRVDDTLPLDIAALQERERESTGEQQGVQETFFTRSDVADV-EGCSGQGINY----DTTNTRSRPSELFDSLDVSARASEAGGGLLPRADGRSDEIGAPAISATARFAPGTEFITPQNVRSPDKAPKNTKIRHRDHALNDQNVSTMAALTVETHSGRYTATSGDASPPRRDRP--LIKAVPEEATEPKTRRXXXXXXXRVPILRPARAVQSPPAVPSRKSTTKPTGDVKCKLREPPHASRLRAPGWGREAVITAILPAKVTPGMAKDGSSPATTASHNGAAPTDPAVLPWDLLTPLTEAATVDERSVVSHGTHGTTKMTPASSVTSGCRPPQE-EASDAIQGRVNRRRPHRLQADANPYVAAAAPVVCALESPAETSGFGDGRNQNGSEKRAVWGSGIVAS--------GAHSAPGTTSARSRRRDA-PAGGALTSSSAYRASPLSSTADHVGTGGSVFSSASGETNPGRQCGGGYVAAMGRRARSMARCEAARRLAAA-MAADRGRPSTPISERARWGKGKESQVEVERRKLLQRRAEYAEELQKKAKEEAMELARRKCLAANASTMLPADPRHVRAGATSATSTVYQQNSTLYDADKSIGGCQGKVPSAIEANFTHDITRPE--AIDGRHQDKPPCLAPGSKVNSPVSSR-----RCDVGVGGDDGGLHRRQKAKRQIAKXXXXXXXXX--RLTASIARLDTLLREGDG----EASRRASNAPMPGGSGGVTRSKSRGRVE-RSPARAPVGGIAKTRVRTGATKGITSSAGPL---VNVEPQAGS---VSVAAAVPVHETAVADAGAAIMASPGLFPQIFDRVPAHTGGGREMGRYEPPDAVQQAPYGSSRGGAYRE-PASHCPVSRAASPLSYRYCADDEQRRPKRTDGGPIDAAPGHYRQEGRRSAGAVS-RWVGDGNDRYHYDARAPPRYPAQREERWVPQTPCSPTRYRGVDSSDDNHRGWHDHCRG-RSYYRRDDLRAAIDPRDAPGVVDHAR--WIGESRPE 1546          
BLAST of mRNA_L-elsbetiae_contig5335.13503.1 vs. uniprot
Match: D7FII2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII2_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 1.190e-124
Identity = 362/829 (43.67%), Postives = 426/829 (51.39%), Query Frame = 0
Query:  678 SQGGPPGKATSVELIACVPRSQTNQASREAP------IKLRLPERAPESPKMAPRRTAKATPGAQRNSESRDVTCVSRLRAPGWGREATITAIPPASTAAGEAEAGTRHHAAAAV--AAPADAALLPWDLLTPVTEAATVDEHSAVSRGTRGTSRMTPASSDVSGSGPPDQGEGAGAVRSRFHRRSPQSLRAEPHRGAA---------------SGPAADRNGHGRQKRAMWGSGGVVSSGGGGSGSGAHSAPCKSTARPKRMSAIPSAGALSSQSGYRSSPLSGAGDRVGARGSTFSSASEETRPGRQAGGGYVAAMGRRARSIARCEAARRQAVATMVAKRARPSTPISERARWGKGRESQQEDATALARRKCVAA-TPAMLPADPRHVRAVAVG-------HDSPSCDAGARAGAREGSAPRATGARTNRDSARCDTPVVDGRDRGSRVLPDSPALSRAVSRNGQGRRGXXXXXXERGVTHRRQKPDARFTPDHQSTGEGEEERLMASIARLDTLLHEESGGATANASRKIPYSPRSGVGVRTDPSKSGGETEQKAVVRVPAVGIAKSRVRNGGGKE-TKTCRPLGVSPTMAPKLGANHGVSMPAAIGVANDY---ADGTVPSGPGMFPPLFSRVPACPSERRERGRCAPSDADEMRTNSPMVEAAISHVPASHVP--------GTRHVTGREQQWTGRRDYGPREAMPGQYHPPHDNSQPAVSSRRVADIISRG-GDVARGMGAR--------RQEEWVQRVPCSPGRYRDTRHG-DSPRGWHGY-HGGEREFYSDRAAASDPRDVWGDVRTERRDWAGEPRPDD 1452
            + G  P       L+  VP   T   +R         + +  PERA +SP   P R     P      + R+    SRLRAPGWGREA ITAI PA    G A+ G+     A+    AP D A+LPWDLLTPVTEAATVDE S +S GT GT+RMTPASS  SG  PP QGE +GA++ R  RR P  L+A+ +R A                SG    RN +G +KR +WGSG V S        GAHSAP  ++AR +R  A P+ GAL+S S YR+SPLS   DRVG  GS FSSAS ET  GRQ GGGYVAAMGRRARS+ARCEAARR A A M A R RPSTPISERARWGKG+ESQ+E A  LARRKC AA T  MLPADPRHVRA A          DS   DA    G  +G  P A  A    D+ R +      +D+   + P S A S   SR   G R         G  HRRQK   +           E  RL ASIARLDTLL E  G  +  AS         GV   T  SKSGG  E++ V R P  GIAK+RVR G  KE T +  P+     + PK G    VS+ AA+ V       A   + + PG+FPP+F RVPA     RE GR  P DA +  +N P    A    PASH P          R+    EQ+   R D GP +A PG Y             RR A   SR  GD      AR        R+E  V + PCSP RYR   +  D+ RGWH +  GG      D  AA DPRD  G V   R  W GE RP++
Sbjct:   16 TSGDAPPPRRDRPLVKVVPEETTEPITRRXXXXXXXRVAILRPERAVQSPPTVPSRKLTTKPTGDGKCKLREPPHTSRLRAPGWGREAVITAILPAKVTPGMAKDGSSPATTASHNGVAPTDPAVLPWDLLTPVTEAATVDERSVISHGTHGTTRMTPASSVTSGCRPP-QGEASGAIQGRVSRRYPHRLQADANRYAVAAAPVVCALESPAETSGFGDGRNQNGSEKRVVWGSGTVAS--------GAHSAPGTTSARSRRRDA-PAGGALTSSSAYRASPLSSTADRVGTGGSVFSSASGETNLGRQFGGGYVAAMGRRARSMARCEAARRLAAA-MAADRGRPSTPISERARWGKGKESQEE-AMELARRKCAAANTSTMLPADPRHVRAGATSASSTAFQKDSTPYDADTSMGGCQGKVPSAIEANFTHDTTRPEAIDSRHKDKPPCLAPGSKANSPVSSRRCDGLRVGVGGGD--GGLHRRQKAKRQIAKSXXXXXXXE--RLTASIARLDTLLREGDGEVSGRASDAPMPGGSGGV---TPSSKSGGRVERRPV-RAPVGGIAKTRVRRGATKEITSSAGPV---VNVEPKAGL---VSVAAAVPVHTTAVVDAGAAIMASPGLFPPIFGRVPAHTGGGREIGRYEPPDAVQQTSNGPSRGVAYRE-PASHCPIGRAASPLSYRYCADDEQRRAKRADGGPVDAAPGHY---------CQEGRRPAGAASRWVGDGNDHYDARAPPRYPDQREELRVPQTPCSPARYRGVDNSYDNHRGWHDHSRGGSYYRRDDLRAAIDPRDAPGVVDHAR--WIGESRPEE 806          
BLAST of mRNA_L-elsbetiae_contig5335.13503.1 vs. uniprot
Match: D7FII1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII1_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.050e-22
Identity = 102/281 (36.30%), Postives = 124/281 (44.13%), Query Frame = 0
Query:    9 QERVRSARKQFRSWRRQGSPAPHPAVTDGVVCHHEPPEGRAHHPHSPTPVASVPWAPRPVGLNSAEHRRASFRGRPSSPVGAVCT---WKAGAGSTEKRVRSSNSGSSGSRSSLRNSRDEGFRGKGST-QGKPAAMGHVKTAIDSGVAIERSDTPGSGKAVREQSRDERWGNLPPELRAIKDRWLGESSEEIEPQPAVSDAVPSTFAAGSTPPRGDRQ----YKQVARSEADPPDRDARLEGPYSSARGPPFHDAQGSRTGAKGLVPGKTAGEEEERRQGC 281
            QE  RS RK  RSWR+QGSPAP   V D  V     P  + +   +P    +   A RP  L S     A+    PS+ VG VC    W+  A  T     + +  +                G+G T   K  A+      + S V +E  D   +G   REQSR  RW NLPPELRAIKDRWLG SSEEI PQ A SD   S  A  + P  G  Q    Y Q  RS   P D+D R   P     G   HD  G   GA+     +   E E++  GC
Sbjct:  111 QEYARSVRKNIRSWRKQGSPAP---VGDSTVQKPAQPWEQKNRGGTPVISGTGQSATRPAKLTSTRKGNANVNWSPSNSVGGVCALEEWEDVAEMTGISAWTRHEAA----------------GRGETISPKLTAVIDRSYLVSSDVGVEGGDV--AGWDSREQSRGGRWANLPPELRAIKDRWLGSSSEEITPQAATSDITVSAGATITAPAHGGWQDQHSYFQEYRSRVVPRDKDFRYAHPNILVEGSAPHDNHGRLEGAETKTTSEMVDEMEKQGHGC 370          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5335.13503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J8B5_9PHAE8.720e-16037.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FII2_ECTSI1.190e-12443.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FII1_ECTSI1.050e-2236.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5335contigL-elsbetiae_contig5335:2686..9663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5335.13503.1mRNA_L-elsbetiae_contig5335.13503.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5335 2686..9663 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5335.13503.1 ID=prot_L-elsbetiae_contig5335.13503.1|Name=mRNA_L-elsbetiae_contig5335.13503.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1468bp
MFSVRARLQERVRSARKQFRSWRRQGSPAPHPAVTDGVVCHHEPPEGRAH
HPHSPTPVASVPWAPRPVGLNSAEHRRASFRGRPSSPVGAVCTWKAGAGS
TEKRVRSSNSGSSGSRSSLRNSRDEGFRGKGSTQGKPAAMGHVKTAIDSG
VAIERSDTPGSGKAVREQSRDERWGNLPPELRAIKDRWLGESSEEIEPQP
AVSDAVPSTFAAGSTPPRGDRQYKQVARSEADPPDRDARLEGPYSSARGP
PFHDAQGSRTGAKGLVPGKTAGEEEERRQGCQDGTCASRYDIRRGGVSVD
CSERSHARRHMIRDAPETQGRDMLRTKGLSEADEQSDRHPHPSPVAESTA
VHQDLRCSGAGREARCPQSGEVLNARALGDQGGEGGGRGEPAQNTNVPGI
RQEEELDVSMAPAFGGALEAPGGTHRRDKVRNQLRALRSRLPRSATGEIP
PAVSPTLLRGGERFVPPSREECQTSARIQPSSNTRAPSEADEAGDVGQGR
DRQRSNGRAGATGAGGTGRRLATPAAMVPPVMVHEAPGQAAGGKLRMGST
LLENDERVGAESKRPNAATVQADVAVLAEGVSTDRVGGRSTGETTSASSR
PSELFDSLDLSASAPHNGGVLATGAPAAAQPAPRTAAATYQTSPFQSVKG
LEHANFPNRTVVAVAAPTTLEMPPPSLSQGGPPGKATSVELIACVPRSQT
NQASREAPIKLRLPERAPESPKMAPRRTAKATPGAQRNSESRDVTCVSRL
RAPGWGREATITAIPPASTAAGEAEAGTRHHAAAAVAAPADAALLPWDLL
TPVTEAATVDEHSAVSRGTRGTSRMTPASSDVSGSGPPDQGEGAGAVRSR
FHRRSPQSLRAEPHRGAASGPAADRNGHGRQKRAMWGSGGVVSSGGGGSG
SGAHSAPCKSTARPKRMSAIPSAGALSSQSGYRSSPLSGAGDRVGARGST
FSSASEETRPGRQAGGGYVAAMGRRARSIARCEAARRQAVATMVAKRARP
STPISERARWGKGRESQQEDATALARRKCVAATPAMLPADPRHVRAVAVG
HDSPSCDAGARAGAREGSAPRATGARTNRDSARCDTPVVDGRDRGSRVLP
DSPALSRAVSRNGQGRRGGGGGGGERGVTHRRQKPDARFTPDHQSTGEGE
EERLMASIARLDTLLHEESGGATANASRKIPYSPRSGVGVRTDPSKSGGE
TEQKAVVRVPAVGIAKSRVRNGGGKETKTCRPLGVSPTMAPKLGANHGVS
MPAAIGVANDYADGTVPSGPGMFPPLFSRVPACPSERRERGRCAPSDADE
MRTNSPMVEAAISHVPASHVPGTRHVTGREQQWTGRRDYGPREAMPGQYH
PPHDNSQPAVSSRRVADIISRGGDVARGMGARRQEEWVQRVPCSPGRYRD
TRHGDSPRGWHGYHGGEREFYSDRAAASDPRDVWGDVRTERRDWAGEPRP
DDQTAGRWRGGGNRDWDR
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