prot_L-elsbetiae_contig5309.13469.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5309.13469.1
Unique Nameprot_L-elsbetiae_contig5309.13469.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length230
Homology
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BLAST of mRNA_L-elsbetiae_contig5309.13469.1 vs. uniprot
Match: D7G920_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G920_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 6.580e-97
Identity = 169/231 (73.16%), Postives = 185/231 (80.09%), Query Frame = 0 
Query:    1 MATPAPA-GGVVASKARKPLPVTAGEKIVAGENLRDEAQSLVE-DKPKKAAVKFRTVFAYTKGLIPHTSELAMYAAATGQQTVIDAEQQVAVRALELSCNEGLASIYFRSGDHEKALGFSDKVLLAEPESAKALFRSGQLNLRLKNIEAAKRCLTRAAKHEPQNVNVLKELRNLTKLAQEEGAEAXXXXXXXXXXXXXXXXXXVIEKEEEKGEKGHSAGDKRKCPKDSEDA 229
            M+TP PA GG  AS AR+PLP T G+KIV GE LRDEAQSL++ DKPK AAVKFRTVFAYTKGLIP TSELA+YAA TGQQTVID +QQVAVRALELSCNEGLA+IYFRSG HEKALG+S+KVLLAEPESAKALFR+GQLNLRLKNIEAAKRCLTRAAKHEPQNVN+  ELRNLTKLAQ EG EA                        E+G++  SAGDKRKCPK SE+A
Sbjct:   47 MSTPVPATGGAAASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAVTGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTESATT-----------------EEGKE--SAGDKRKCPKSSEEA 258
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BLAST of mRNA_L-elsbetiae_contig5309.13469.1 vs. uniprot
Match: A0A0G4FHV5_VITBC (Peptidylprolyl isomerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FHV5_VITBC)

HSP 1 Score: 60.8 bits (146), Expect = 2.510e-7
Identity = 48/169 (28.40%), Postives = 79/169 (46.75%), Query Frame = 0 
Query:   11 VASKARKPLPVTAGEKIVAGENLRDEAQSL-VEDKPKKAAVKFRTVFAYTKGLIPHTSELAMYAAATGQQTVIDAEQQVAVRALELSCNEGLASIYFRSGDHEKALGFSDKVLLAEPESAKALFRSGQLNLRLKNIEAAKRCLTRAAKHEPQNVNVLKELRNLTKLAQE 178
            +A+K R P  ++  E++ A  + +++   L V+   + A   +     Y  GL    +ELA                   V+ +++S N  L+++Y R G+    +    +VL  +P  AKALFR G+ N     IE  +R L  AAK EPQN  + +EL N  +  +E
Sbjct:  108 IAAKPRSPSSMSVEERLQAAMDAKEQGNHLLVQGNLQDAHKHYNLALEYFDGLDEPPTELADR-----------------VKTMKVSINLNLSNLYLRQGNWVSTILHCSEVLKLDPRCAKALFRRGRANTEFGAIEEGRRDLLEAAKLEPQNAEIRRELENCKRRLRE 259
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5309.13469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G920_ECTSI6.580e-9773.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4FHV5_VITBC2.510e-728.40Peptidylprolyl isomerase n=2 Tax=Vitrella brassica... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 129..162
e-value: 0.14
score: 21.2
coord: 95..128
e-value: 98.0
score: 6.3
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 129..161
e-value: 0.025
score: 14.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 129..162
score: 8.437
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 95..128
score: 7.198
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 21..186
e-value: 9.8E-18
score: 66.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 84..173
IPR042282Inactive peptidyl-prolyl cis-trans isomerase FKBP6/shutdownPANTHERPTHR46674FAMILY NOT NAMEDcoord: 81..179
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 95..162
score: 13.64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5309contigL-elsbetiae_contig5309:3616..7600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5309.13469.1mRNA_L-elsbetiae_contig5309.13469.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5309 3539..7600 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5309.13469.1 ID=prot_L-elsbetiae_contig5309.13469.1|Name=mRNA_L-elsbetiae_contig5309.13469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MATPAPAGGVVASKARKPLPVTAGEKIVAGENLRDEAQSLVEDKPKKAAV
KFRTVFAYTKGLIPHTSELAMYAAATGQQTVIDAEQQVAVRALELSCNEG
LASIYFRSGDHEKALGFSDKVLLAEPESAKALFRSGQLNLRLKNIEAAKR
CLTRAAKHEPQNVNVLKELRNLTKLAQEEGAEAAAAAAAAAAASSSSAPA
PVIEKEEEKGEKGHSAGDKRKCPKDSEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR042282FKBP6/shu
IPR013026TPR-contain_dom