prot_L-elsbetiae_contig5307.13467.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5307.13467.1
Unique Nameprot_L-elsbetiae_contig5307.13467.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length317
Homology
BLAST of mRNA_L-elsbetiae_contig5307.13467.1 vs. uniprot
Match: D8LCN8_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN8_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 2.150e-124
Identity = 238/322 (73.91%), Postives = 254/322 (78.88%), Query Frame = 0
Query:    5 GAGSAGMAMTGGMAFGGNAMGTPATFSSGFQPPPSGHAHGGPGDTCXXXXXXXAYDLRALQ---KEEEPVEDMHACLGVDVGTSTIKASLYLKDGGCKAVGGKAPLPACIQVDKKTGVKGVRRWLKSRAGGGSTSATPAKGVKLFYAGAXXXXXXXXXXXXXR-------KGAVVVWPLRLLALRGKGAEATQRVKSSLRHEIEVSSEDPKDAAAATEDQNEDDGDTSGVRLLLTSPDASDAKDREVWCTPEEVLAMLLEGVKAKAEEAHGVTLITCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVGAPLAAAVGCLWGR 316
            G G AGMAM  GMAFGG  MGTP+TF      PP            XXXXXXX YDLRA     +EEE  ED HACLGVDVGTS+IKA LYLKDGGCK VGGKAPLPA I +D+KTGVKGVRRWLKSRAGGG   A PAKGVKLF+A   XXXXXXXXXXXX         GA VVWPLRLLALRGKGAEATQRV+SSLRH+IEVSS + K+A   T+DQ   DGDTSGVR+LLTSPDA++ KDREVW TPEEVLAMLL GVKAKAEEAHGV + TCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVG+PLAAAVG LWGR
Sbjct:   15 GGGGAGMAMGPGMAFGGTGMGTPSTFR-----PPXXXXXXXXXXXXXXXXXXXXYDLRAAACEAEEEELDEDTHACLGVDVGTSSIKACLYLKDGGCKTVGGKAPLPAGILIDRKTGVKGVRRWLKSRAGGGQAPAAPAKGVKLFHAVGGXXXXXXXXXXXXXXXXXXDGNGAAVVWPLRLLALRGKGAEATQRVQSSLRHDIEVSSVESKEA---TDDQG--DGDTSGVRVLLTSPDAAETKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGR 326          
BLAST of mRNA_L-elsbetiae_contig5307.13467.1 vs. uniprot
Match: A0A835Z170_9STRA (Hsp70 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z170_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.190e-32
Identity = 108/288 (37.50%), Postives = 133/288 (46.18%), Query Frame = 0
Query:   36 PPPSGHAHGGPGDTCXXXXXXXAYDLRALQKEEE-PVEDMHACLGVDVGTSTIKASLYLKDGGCKAVGGKAPLPACIQVDKKTGVKGVRRWLK--SRAGGGSTSATPA------KGVKLFYAGAXXXXXXXXXXXXXRKGAVVVWPLRLL-ALRGKGAEATQRVKSSLRHEIEVSSEDPKDAAAATEDQNEDDGDTSGVRLLLTSPDASDAKDREVWCTPEEVLAMLLEGVKAKAEEAHGVTLITCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVGAPLAAAVGCL 313
            PP  G    G  D C       AYDLR     +  P ED+ ACLGV +G +T  A LYL D G   + G+APLPA + +D KTG +G+R+W K  SR+G    + T         G+    AG              R+ A   WP+ L+ A RG                         DAA           DTSGV + L      +A      C PE +LA LL  ++ KA  A  V  +TCN + P   GD  RVALQR+VFLAGM P RFV APLAAAVG L
Sbjct:   35 PPTFGAGAAGCADACCGAGG--AYDLRGQAAADAGPQEDLSACLGVALGATTYSACLYLADKGAVPLTGRAPLPAALWLDPKTGARGLRKWAKRDSRSGALPKAVTVGLRGEGEAGLLRVPAGMRLLGARHRPGALLREAAA--WPVELVEAARGD------------------------DAA----------DDTSGVHICLPG----EAGQEWRACEPEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGAL 280          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5307.13467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCN8_ECTSI2.150e-12473.91Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A835Z170_9STRA1.190e-3237.50Hsp70 protein-domain-containing protein n=1 Tax=Tr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013126Heat shock protein 70 familyPFAMPF00012HSP70coord: 243..310
e-value: 1.5E-4
score: 20.1
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 239..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5307contigL-elsbetiae_contig5307:5541..12361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5307.13467.1mRNA_L-elsbetiae_contig5307.13467.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5307 5541..12361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5307.13467.1 ID=prot_L-elsbetiae_contig5307.13467.1|Name=mRNA_L-elsbetiae_contig5307.13467.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp
MAGAGAGSAGMAMTGGMAFGGNAMGTPATFSSGFQPPPSGHAHGGPGDTC
CGGGGGGAYDLRALQKEEEPVEDMHACLGVDVGTSTIKASLYLKDGGCKA
VGGKAPLPACIQVDKKTGVKGVRRWLKSRAGGGSTSATPAKGVKLFYAGA
GGGGGGKGGAEDDRKGAVVVWPLRLLALRGKGAEATQRVKSSLRHEIEVS
SEDPKDAAAATEDQNEDDGDTSGVRLLLTSPDASDAKDREVWCTPEEVLA
MLLEGVKAKAEEAHGVTLITCNLSAPGCLGDLHRVALQRSVFLAGMVPGR
FVGAPLAAAVGCLWGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013126Hsp_70_fam