prot_L-elsbetiae_contig53.13455.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig53.13455.1
Unique Nameprot_L-elsbetiae_contig53.13455.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length282
Homology
BLAST of mRNA_L-elsbetiae_contig53.13455.1 vs. uniprot
Match: D7G0T4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T4_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 6.460e-75
Identity = 208/298 (69.80%), Postives = 218/298 (73.15%), Query Frame = 0
Query:    1 MRTVAFACVAAACAGGADAFVGSMRPPVSSSVRRAG--SSVRMAADATVPDLLKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVTGIALETFVAFPLLFVLPAVCGVAGFALTGLKNGSLVNLITSS---KPAPAPKVECTASSPARAKASKSSGPVAXXXXXXXXXXXXRPS------------AAPKAKAAPKPAPKXXXXXXXXXXVKPSGNIANLPKAL 281
            M+TVAFAC  AACAGGADAFVGSMRP  SSS+RRAG  SSVRMAAD TVPDLLKQTEKLKLL                 TLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSV+ IA+ETFVAFPLLFVLPAVCGVAGFALT LKNGSLV+ ITS+   KPA A  V  ++ +P   KASK S P A              S            AAPK KAAPK         XXXXX KP+GNIANLPKAL
Sbjct:    1 MKTVAFACAVAACAGGADAFVGSMRP-ASSSMRRAGPSSSVRMAADVTVPDLLKQTEKLKLLXXXXXXXXXXXXXXXXXTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVSSIAIETFVAFPLLFVLPAVCGVAGFALTSLKNGSLVDFITSTASPKPAAASPV-ASSXAPVAVKASKPSAPAAAPKSSGGRPAVGARSXXXXXXXXXXXXAAPK-KAAPK---------XXXXXXKPAGNIANLPKAL 286          
BLAST of mRNA_L-elsbetiae_contig53.13455.1 vs. uniprot
Match: A0A835Z532_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z532_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.970e-18
Identity = 86/196 (43.88%), Postives = 113/196 (57.65%), Query Frame = 0
Query:    1 MRTVAFACVAAACAGGADAFV--GSMRPPVSSSVRRAGSSVRMAADATVPDLLKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVTGIALETFVAFPLLFVLPAVCGVAGFALTGLKNGSLV 194
            ++ +A A   AACA  ADAF   GS+RP V+    R G ++ ++   +V +LL +TE+LKLLSTAS            LTL+D+E  LP +D+ D I L K + PDLL +AP     XXXXXXXXXXXXXXXXX            G A +  +PDDS+  IAL+ F+A PLL + P    V    LT   +G+LV
Sbjct:    2 VKAIAAAAAIAACATSADAFAVPGSVRPAVA----RRGMTMAVS-KGSVQELLIKTEELKLLSTASXXXXXXXXXXXXLTLRDLEAALPFLDDIDAIALGKELSPDLLAIAPKALEAXXXXXXXXXXXXXXXXXALLTGAALSVVAGLAAIAAIPDDSIGAIALQAFLAVPLLVLAPGAAVVGAGVLTKANDGTLV 192          
BLAST of mRNA_L-elsbetiae_contig53.13455.1 vs. uniprot
Match: A0A7S4EDC9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDC9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.540e-9
Identity = 48/138 (34.78%), Postives = 66/138 (47.83%), Query Frame = 0
Query:   51 LKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVTGIALETFVAFPLLFVLPAVCGVAGFALTGL 188
            L+  E+ +LL+  +K GLLSK E AG+ L D+E LL   +EN L+GL   +  DLL + P                                  GA +VT LPDDSVT +AL+T +A PL  + P + G  G   + L
Sbjct:   39 LEVVEETQLLTKLAKTGLLSKAERAGVKLADLEPLLLFAEENGLVGLLGDLNDDLLPLLPLLVRLAPLGLPVVSLALGLGPLNFLLAIASFG--GAFVVTGLPDDSVTDVALQTLIAVPLATLFPVLFGGLGLVSSKL 174          
BLAST of mRNA_L-elsbetiae_contig53.13455.1 vs. uniprot
Match: A0A8J2X3T7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3T7_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.210e-9
Identity = 48/138 (34.78%), Postives = 66/138 (47.83%), Query Frame = 0
Query:   51 LKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVTGIALETFVAFPLLFVLPAVCGVAGFALTGL 188
            L+  E+ +LL+  +K GLLSK E AG+ L D+E LL   +EN L+GL   +  DLL + P                                  GA +VT LPDDSVT +AL+T +A PL  + P + G  G   + L
Sbjct:   52 LEVVEETQLLTKLAKTGLLSKAERAGVKLADLEPLLLFAEENGLVGLLGDLNDDLLPLLPLLVRLAPLGLPVVSLALGLGPLNFLLAIASFG--GAFVVTGLPDDSVTDVALQTLIAVPLATLFPVLFGGLGLVSSKL 187          
BLAST of mRNA_L-elsbetiae_contig53.13455.1 vs. uniprot
Match: A0A6U1PC24_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PC24_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.320e-8
Identity = 51/172 (29.65%), Postives = 76/172 (44.19%), Query Frame = 0
Query:   24 MRPPVSSSVRRAGSSVRMAA------DATVPDLLKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVTGIALETFVAFPLLFVLPAVCGVAGFALTGLK 189
            M  P  SS  +A SS R+A       +  + + L + E LKLL+  SKLGLLSK E  G++L  +E  L L DE+ ++   +        + P                                  GA  +  +PDDS+T +AL++F+A PL+ V+P    V    L+ LK
Sbjct:   25 MAAPALSSSTKAFSSPRVAPLQGTVEEEAIAETLIKAENLKLLTRVSKLGLLSKAEKFGISLSKLEPFLKLADESGVLLELEKSSAKTFPLLPKAVDQAPALLSLAESALALNPSVLLAGAAASAAAGAYAIYAIPDDSITNMALQSFIAIPLIAVIPGAAVVGSTVLSKLK 196          
BLAST of mRNA_L-elsbetiae_contig53.13455.1 vs. uniprot
Match: A0A0G4F6S3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F6S3_VITBC)

HSP 1 Score: 57.8 bits (138), Expect = 2.050e-6
Identity = 50/146 (34.25%), Postives = 70/146 (47.95%), Query Frame = 0
Query:   47 VPDLLKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVTGIALETFVAFPLLFVLPAVCGVAGFALTGLKNGS 192
            VP +LK+TE+L+LLS  ++           LTL  +E LL +VDE   +   + V P ++   PA   XXXXXXX                       G   +  LPDDSVT +AL+TF+  PL  +LP V  V  F    +++ S
Sbjct:   55 VPRVLKRTEELQLLSKLAEAXXXXXXXXXXLTLSQIEPLLKVVDEQYALYGLEEVAPKIVPALPALLEXXXXXXXVASAVLSTPWFVFVLLSIASFAGGVGQLLYLPDDSVTSVALQTFLFVPLAVILPGVALVTAFITARVQSKS 200          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig53.13455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G0T4_ECTSI6.460e-7569.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z532_9STRA1.970e-1843.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4EDC9_9STRA2.540e-934.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2X3T7_9STRA3.210e-934.78Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6U1PC24_9STRA1.320e-829.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4F6S3_VITBC2.050e-634.25Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009500Protein of unknown function DUF1118PFAMPF06549DUF1118coord: 54..124
e-value: 3.5E-7
score: 30.5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..133
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.547
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 134..152
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig53contigL-elsbetiae_contig53:56043..65741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig53.13455.1mRNA_L-elsbetiae_contig53.13455.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig53 56043..66717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig53.13455.1 ID=prot_L-elsbetiae_contig53.13455.1|Name=mRNA_L-elsbetiae_contig53.13455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=282bp
MRTVAFACVAAACAGGADAFVGSMRPPVSSSVRRAGSSVRMAADATVPDL
LKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAKG
VGPDLLKVAPAALAAAPAALPLLAGALGVPGESLYLAGLASFAAGAALVT
VLPDDSVTGIALETFVAFPLLFVLPAVCGVAGFALTGLKNGSLVNLITSS
KPAPAPKVECTASSPARAKASKSSGPVAAKRSSGGRPAAGRPSAAPKAKA
APKPAPKKAAPKPAPKPVKPSGNIANLPKAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009500DUF1118