prot_L-elsbetiae_contig5292.13436.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5292.13436.1
Unique Nameprot_L-elsbetiae_contig5292.13436.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length210
Homology
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BLAST of mRNA_L-elsbetiae_contig5292.13436.1 vs. uniprot
Match: D7FWS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS8_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 3.370e-25
Identity = 61/112 (54.46%), Postives = 75/112 (66.96%), Query Frame = 0 
Query:   13 EADKKHRAAFKARVSENRRKARFEKGRPQRDVRMSTLVRLLDAVLEIEPWNSARHVSGRAAAWGDCGRRA-GLLKDKGKANAHKTVQQRVYRLARQLNDSTSGFLWKGYPEV 123
            EADK+ RAA KA+  E  RKAR E  RP+RD +M+ L+RLLDAVLE+EPWN ARH    + AW +CGRR  G LK+  +      VQQ+V+RL  QL D T+   WK YPEV
Sbjct:   19 EADKRRRAARKAKGLEASRKARAEMRRPRRDEKMALLLRLLDAVLEVEPWNLARHTKV-SEAWEECGRRVPGYLKEGARTEPRLLVQQQVFRLGDQLIDPTAKTPWKSYPEV 129
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5292.13436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWS8_ECTSI3.370e-2554.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5292contigL-elsbetiae_contig5292:1879..4725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5292.13436.1mRNA_L-elsbetiae_contig5292.13436.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5292 985..4792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5292.13436.1 ID=prot_L-elsbetiae_contig5292.13436.1|Name=mRNA_L-elsbetiae_contig5292.13436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=210bp
MCLTSHKRMGGQEADKKHRAAFKARVSENRRKARFEKGRPQRDVRMSTLV
RLLDAVLEIEPWNSARHVSGRAAAWGDCGRRAGLLKDKGKANAHKTVQQR
VYRLARQLNDSTSGFLWKGYPEVTERVVKVAAKLRVDSDLKGTLGPDRMQ
GLVEHRASNPATPERPRAIAEQRQQLQGPEVPGAYTELQVALRFFVAAAE
RASHSAMAC*
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