prot_L-elsbetiae_contig529.13429.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig529.13429.1
Unique Nameprot_L-elsbetiae_contig529.13429.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length188
Homology
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BLAST of mRNA_L-elsbetiae_contig529.13429.1 vs. uniprot
Match: A0A6H5KVK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK7_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 5.400e-18
Identity = 102/167 (61.08%), Postives = 114/167 (68.26%), Query Frame = 0 
Query:   29 DGAVAPGARRSRRSASLGHEQDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRIACFPSVEARIRALKSKPDDKGILTMLRQLRYLQTGGGEGGXXGHRVGDGRSEKILAADGHGAIFASAXXXXXXXXDAGGCGPRN--------VLTGAEVEKLILEEL 187
            D  V  G RRSRRSAS+G EQD EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TRIACFPSVEAR+RALKSKPDD+GILT+LRQL++LQT   EGG                  G        XXXXXX  D G  GP+N        VLT A++E+++LEEL
Sbjct:  934 DAEVGAGGRRSRRSASMGQEQDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQTACEEGGKE---------------FGXXXXXXXXXXXXXXVVDDGVLGPKNEVKNVSNNVLTDAQIERILLEEL 1082
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BLAST of mRNA_L-elsbetiae_contig529.13429.1 vs. uniprot
Match: D7FK51_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK51_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.890e-14
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 0 
Query:   86 TRIACFPSVEARIRALKSKPDDKGILTMLRQLRYLQTGGGEGGXXGHRVGDGRSEKILAADGHGAIFASAXXXXXXXXDAGGCGPRN--------VLTGAEVEKLILEEL 187
            TRIACFPSVEAR+RALKSKPDD+GILT+LRQL++LQT   EGG           +++             XXXXXX  D G  GP+N        VLT A++E+++LEEL
Sbjct:  839 TRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQTASEEGG-----------KEVXXXX--XXXXXXXXXXXXXVVDDGALGPKNDVKNVLNNVLTDAQIERILLEEL 935
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig529.13429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVK7_9PHAE5.400e-1861.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK51_ECTSI2.890e-1450.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig529contigL-elsbetiae_contig529:17019..18385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig529.13429.1mRNA_L-elsbetiae_contig529.13429.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig529 17019..18617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig529.13429.1 ID=prot_L-elsbetiae_contig529.13429.1|Name=mRNA_L-elsbetiae_contig529.13429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
GGGGGAGHGLPVAGLAVGQGGGGGEDVDDGAVAPGARRSRRSASLGHEQD
DEVDSPPPPSKRYRNNGSGSGNGNASSSSSGSSTKTRIACFPSVEARIRA
LKSKPDDKGILTMLRQLRYLQTGGGEGGGGGHRVGDGRSEKILAADGHGA
IFASAAAAAGGGGDAGGCGPRNVLTGAEVEKLILEEL*
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