prot_L-elsbetiae_contig529.13428.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig529.13428.1
Unique Nameprot_L-elsbetiae_contig529.13428.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length243
Homology
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BLAST of mRNA_L-elsbetiae_contig529.13428.1 vs. uniprot
Match: A0A6H5KVK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK7_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.250e-10
Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:  156 SGGAGTGAGREAATEAMRGPLVEALHQIAQLPFSAAELWSLHQFYFSPP-EAHPRP 210
            SGG GT     A  EA+R  LVEALHQIAQLPFSAAELWSLHQ YFSPP + HP P
Sbjct:  799 SGGDGTERAAAAVPEALRASLVEALHQIAQLPFSAAELWSLHQHYFSPPLDHHPSP 854
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BLAST of mRNA_L-elsbetiae_contig529.13428.1 vs. uniprot
Match: D7FK51_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK51_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.340e-9
Identity = 35/45 (77.78%), Postives = 37/45 (82.22%), Query Frame = 0 
Query:  167 AATEAMRGPLVEALHQIAQLPFSAAELWSLHQFYFSPP-EAHPRP 210
            A  EA+R  LVEALHQIAQLPFSAAELWSLHQ YFSPP + HP P
Sbjct:  662 AVPEALRASLVEALHQIAQLPFSAAELWSLHQHYFSPPLDHHPSP 706
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig529.13428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVK7_9PHAE1.250e-1071.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK51_ECTSI1.340e-977.78Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig529contigL-elsbetiae_contig529:15763..16949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig529.13428.1mRNA_L-elsbetiae_contig529.13428.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig529 15763..16951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig529.13428.1 ID=prot_L-elsbetiae_contig529.13428.1|Name=mRNA_L-elsbetiae_contig529.13428.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp
AAAAVAEEEKEQGGNISNRNGGRIGDRIGGGAGKDLSGVAASNGIPVQQM
QQRRQQQQQTGGRGGGGGAPIAVTKDAPPTQHHQHMRPNTSPQAAPVAGI
GLREVAQSAPVGSGGGSDGSASERKVHGRGHAASEHVPAANPEGDGRVVG
RRRSGSGGAGTGAGREAATEAMRGPLVEALHQIAQLPFSAAELWSLHQFY
FSPPEAHPRPSPSPASAASTPSPSAANATGGSWTAAAAAGTAA
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