prot_L-elsbetiae_contig5289.13426.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5289.13426.1
Unique Nameprot_L-elsbetiae_contig5289.13426.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
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BLAST of mRNA_L-elsbetiae_contig5289.13426.1 vs. uniprot
Match: D7FSQ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ9_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.890e-18
Identity = 75/105 (71.43%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:   16 LPRSPAPAMRGSGGDTPLSPPPRTPESRRSNAIVQSPS--GGMVDRRQLFKGQGXXXXXXXXXXXXXXXXXXXKSAARRPRSQSKTPAKRGTPQDVKVMRQGGAG 118
            +PRSP+PA +      P+SPPPRTPES  S A+V+SPS  GGMVDRRQLF G GXXXXXXXXXXXXXXXXXXX    R   +QSKTPAKRGTP+DVKVMRQGG G
Sbjct:   34 VPRSPSPAKQRKSAVIPMSPPPRTPESVSSTAVVESPSAGGGMVDRRQLFGGAGXXXXXXXXXXXXXXXXXXXXXGRR---AQSKTPAKRGTPKDVKVMRQGGDG 135
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5289.13426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSQ9_ECTSI2.890e-1871.43DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5289contigL-elsbetiae_contig5289:3374..5292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5289.13426.1mRNA_L-elsbetiae_contig5289.13426.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5289 3006..5292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5289.13426.1 ID=prot_L-elsbetiae_contig5289.13426.1|Name=mRNA_L-elsbetiae_contig5289.13426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
MAREEKTAVDVTDPALPRSPAPAMRGSGGDTPLSPPPRTPESRRSNAIVQ
SPSGGMVDRRQLFKGQGGGSSSSSNASTMPPPPTTPKSAARRPRSQSKTP
AKRGTPQDVKVMRQGGAGSSSS
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