prot_L-elsbetiae_contig5288.13425.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5288.13425.1
Unique Nameprot_L-elsbetiae_contig5288.13425.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length216
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5288.13425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 202..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..138
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 171..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5288contigL-elsbetiae_contig5288:2955..3602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5288.13425.1mRNA_L-elsbetiae_contig5288.13425.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5288 2955..3919 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5288.13425.1 ID=prot_L-elsbetiae_contig5288.13425.1|Name=mRNA_L-elsbetiae_contig5288.13425.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
DRLPRAASVLLYSRRLPRVAVVCLFLSFARLPRAASVLLSSRRLPRVAVV
CLFRFLYTPARRRCLVSLFLRRLPRVAVVCFFRFLWTPARRWCLVSLFLR
RLRRVAVVCSCFFGRLPHIAGICFGFISQTPVRCRCLSVFCFSGILSALP
LPLVYFSGRLRLASDLLSFRVVFALCTNWYFLCVFDVAYTCLAVAFSHLY
LGAPHVSFLSQIDCF*
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