prot_L-elsbetiae_contig5271.13401.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5271.13401.1
Unique Nameprot_L-elsbetiae_contig5271.13401.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length226
Homology
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: D8LLH7_ECTSI (PINc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 5.070e-67
Identity = 118/200 (59.00%), Postives = 141/200 (70.50%), Query Frame = 0
Query:   24 LEENKEAVAAVSLAVPTAPNLVVFDTNWFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRRPQCVPGRCLMPFCPATPRPSPFSWSY 223
            +EE K+    VSLA+PTAP LV FDTNW IH LAD MCRV DIA   KD S+LIP  VL ELDRLK RG+DE T+  A+KAN Y   L E    +PLE GR   ++R QE+ TE ++  G  SRP+GL GD SIL+CC++FT+ +D PR+VTL+T DNNF IRA + GL+T  RPQC PG C MP CPA PRPSPFS  Y
Sbjct:  440 VEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVE----KPLERGREFPVVRVQED-TELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 634          
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A6H5JRN9_9PHAE (PINc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.630e-65
Identity = 118/200 (59.00%), Postives = 141/200 (70.50%), Query Frame = 0
Query:   24 LEENKEAVAAVSLAVPTAPNLVVFDTNWFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRRPQCVPGRCLMPFCPATPRPSPFSWSY 223
            +EE K+    VSLAVPTAP LV FDTNW IH LAD MCRV DIA   KD S+LIP  VL ELDRLK RG+DE T+  A+KAN Y   L E    +PLE GR   ++R Q++ TE ++  G  SRP+GL GD SIL+CC++FT+ +D PR+VTL+T DNNF IRA + GL+T  RPQC PG C MP CPA PRPSPFS  Y
Sbjct:  677 VEEIKKKKDTVSLAVPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVE----KPLERGREFPVVRVQDD-TELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 871          
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A836CK80_9STRA (PIN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK80_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.780e-11
Identity = 60/154 (38.96%), Postives = 75/154 (48.70%), Query Frame = 0
Query:   39 PTAPNLVVFDTNWFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGL 192
            P AP L+V DTN  +H L        D+ R   DASIL+P EV RELDR K   + E  +F AR+A   L  L +         G Y + LR Q +  E Y   G  + P  LR D +IL+CCLYF        RV L T D  F   A + G+
Sbjct:  599 PAAPVLLVLDTNCLLHCLEGAARLARDVLRARGDASILVPREVYRELDRKKG-DRVETLQFKAREAGRVLQALLDYPRS-----GEYPA-LRGQGDH-ELYTDSGHHAAPARLRADDAILNCCLYFQNTAGC--RVILCTEDQYFRQIATANGI 742          
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A7S3XKL4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKL4_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 1.880e-10
Identity = 51/131 (38.93%), Postives = 70/131 (53.44%), Query Frame = 0
Query:   41 APNLVVFDTNWFIHNLA--DVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGK---DEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGS-SSRPKGLRGDASILDCCLYFT 165
            AP L VFDTN ++ + A  DV      +     D  +L+P EVLRELD LK  G    DE T F AR+ +  + +L      R L  GR   +LR Q +   +   QG    RP+ LR DA++L+CCL+F+
Sbjct:    7 APVLWVFDTNVWMEDAATGDVRYAANVVLSARPDVQLLLPREVLRELDGLKKGGPGRGDERTAFQAREGSRLVEELLTD--PRGLGAGRRYPLLRGQRDGELWRDPQGGIHGRPERLRADAAVLNCCLHFS 135          
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A7S2XI71_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XI71_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.660e-5
Identity = 52/161 (32.30%), Postives = 75/161 (46.58%), Query Frame = 0
Query:   44 LVVFDTNWFI------HNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILR-FQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRR 197
            L V DTNW I        L D +  +  I    K  ++LIP  V RELD L    +  E K  A++A   + +          E GR SS      + + E Y  +G    P+ L+ D SIL+CCL+F+R       V L T+D N +IRA  + + T+ +
Sbjct:  100 LFVIDTNWLIKEPEVARGLGDKIHALGLI----KKVAVLIPRAVWRELDGLSKSAR--ECKNNAQRAIRSIYN----------EFGRQSSFRTVLGQMDHEIYTDKGHHINPRALKNDDSILNCCLFFSRNQGSV--VHLCTADKNLLIRAKVEQVQTIEK 242          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLH7_ECTSI5.070e-6759.00PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JRN9_9PHAE1.630e-6559.00PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CK80_9STRA1.780e-1138.96PIN domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3XKL4_HETAK1.880e-1038.93Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XI71_9EUKA1.660e-532.30Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002716PIN domainSMARTSM00670PIN_9coord: 43..185
e-value: 1.4E-6
score: 37.8
IPR002716PIN domainPFAMPF13638PIN_4coord: 45..194
e-value: 2.4E-17
score: 63.5
NoneNo IPR availableGENE3D3.40.50.1010coord: 37..201
e-value: 8.3E-23
score: 82.9
NoneNo IPR availablePANTHERPTHR16161UNCHARACTERIZEDcoord: 28..197
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 43..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5271contigL-elsbetiae_contig5271:1212..4038 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5271.13401.1mRNA_L-elsbetiae_contig5271.13401.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5271 1189..5935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5271.13401.1 ID=prot_L-elsbetiae_contig5271.13401.1|Name=mRNA_L-elsbetiae_contig5271.13401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
MTTMKLEGTVDAAAGGTGRSFLSLEENKEAVAAVSLAVPTAPNLVVFDTN
WFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFF
ARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKG
LRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRRPQC
VPGRCLMPFCPATPRPSPFSWSYCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002716PIN_dom
IPR029060PIN-like_dom_sf