prot_L-elsbetiae_contig5269.13397.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5269.13397.1
Unique Nameprot_L-elsbetiae_contig5269.13397.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5269.13397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 2..45
e-value: 2.7E-4
score: 30.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 5..41
e-value: 1.8E-6
score: 27.9
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 5..34
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 5..36
score: 9.182
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 4..82
e-value: 1.6E-7
score: 33.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 5..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5269contigL-elsbetiae_contig5269:7642..9924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5269.13397.1mRNA_L-elsbetiae_contig5269.13397.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5269 7641..9924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5269.13397.1 ID=prot_L-elsbetiae_contig5269.13397.1|Name=mRNA_L-elsbetiae_contig5269.13397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
ATRQPCGSCARRKRVCDGEHPCGGCVEAGLGGHCSFSSKRKSSSSKHQAA
TPRQKHRRESAETLSLLDMSAADPDRARSHGGASSSGGGGGGGHDGRGRS
PHGGSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf