prot_L-elsbetiae_contig5267.13393.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5267.13393.1
Unique Nameprot_L-elsbetiae_contig5267.13393.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length458
Homology
BLAST of mRNA_L-elsbetiae_contig5267.13393.1 vs. uniprot
Match: A0A6H5JBP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP7_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 7.900e-7
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    3 CRHPACTTTPSY--GLEGSMKREYCAQHAPEGMVNVFSK-RCRHPTCT 47
            C   +C+T  SY  GLEGS   +YCA+HA  GM+NV+SK RCRHP+CT
Sbjct:    6 CSQDSCSTDASYAYGLEGSKTAKYCARHAANGMINVYSKKRCRHPSCT 53          
BLAST of mRNA_L-elsbetiae_contig5267.13393.1 vs. uniprot
Match: D8LCI1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI1_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 2.650e-6
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    3 CRHPACTTTPSY--GLEGSMKREYCAQHAPEGMVNVFSK-RCRHPTCT 47
            C    C+T  SY  GLEGS   +YCA+HA  GM+NV+SK RC HP+CT
Sbjct:    6 CSQDGCSTDASYAYGLEGSKTAKYCARHAANGMINVYSKKRCSHPSCT 53          
BLAST of mRNA_L-elsbetiae_contig5267.13393.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.190e-6
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    3 CRHPACTTTPSYGLEGSMKREYCAQHAPEGMVNVFSKRC 41
            C H  CT  P+YG+ GS KRE+C+QHA +GMVNV +KRC
Sbjct:    4 CGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 42          
BLAST of mRNA_L-elsbetiae_contig5267.13393.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.400e-6
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    3 CRHPACTTTPSYGLEGSMKREYCAQHAPEGMVNVFSKRC 41
            C H  CT  P+YG+ GS KRE+C+QHA +GMVNV +KRC
Sbjct:   64 CGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 102          
BLAST of mRNA_L-elsbetiae_contig5267.13393.1 vs. uniprot
Match: A0A6H5JBE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE7_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 5.560e-5
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    3 CRHPACTTT-PSYGLEGSMKREYCAQHA-PEGMVNVFSKRCRHPTCT 47
            C HP C    P+YG+EGS    +CA+H  P G+VNV SK+CRH  CT
Sbjct:  133 CAHPTCNKRRPTYGVEGSYTATHCAEHGEPAGLVNVKSKKCRHSGCT 179          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5267.13393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JBP7_9PHAE7.900e-758.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCI1_ECTSI2.650e-656.25EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FI73_ECTSI3.190e-661.54EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE4.400e-661.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE7_9PHAE5.560e-553.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5267contigL-elsbetiae_contig5267:7600..8973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5267.13393.1mRNA_L-elsbetiae_contig5267.13393.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5267 7341..10113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5267.13393.1 ID=prot_L-elsbetiae_contig5267.13393.1|Name=mRNA_L-elsbetiae_contig5267.13393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=458bp
MPCRHPACTTTPSYGLEGSMKREYCAQHAPEGMVNVFSKRCRHPTCTEKN
PSYGPAGTKKADFCAQHAQEGMVANKRSTCCSHQGCSKRPSYGVDGTDIA
EFCSPHANEGMVDVRSKRCSHASCKTKPSFGLEGTKETVFCSKHAHGGMV
DICSKRCSHAGCTTRPHHGTEGSRKPVFCSRHAHDGMVNVTSKRCGHPTC
NKIASLGKEGTTKNIEFCAQHATDGMVCLSGLRCAHQGCNKSPSYSAAGS
RTGELCAQRARQGMTSVIKKCAHPSCTTIPSYGIDGTKRAEFCARHAHDG
LVDVISKRCAHKGCRTSPSYGFESRRIKEFCAQHAEEGMSGSWTWGRPCN
AREKRARRSVGKRLRTRATTVVAFKKEAKTSVSVEGRYTRASSKRARLAV
EDNNARVARPDAVVVEAAEREVNAVDDCLSSEPGEEVLARHDQRDEGASE
GMTRGSS*
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