prot_L-elsbetiae_contig526.13386.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig526.13386.1
Unique Nameprot_L-elsbetiae_contig526.13386.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length312
Homology
BLAST of mRNA_L-elsbetiae_contig526.13386.1 vs. uniprot
Match: D7G1P1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 5.640e-168
Identity = 233/278 (83.81%), Postives = 254/278 (91.37%), Query Frame = 0
Query:    1 MVYNPPVLKQA--DGEEPVVVTVNPARSGDAYIEQAKRAAAWMGLLLICWLLQRLMCHFGLPPSCDLPRDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGVVIIVIALALSGIETSRWFQDMRFKPNEDWTESHITFAVILITIVLVFVGYHFAEAWRTLPGAYYVSGNINLNIVIKENLHRIYNVSRGLILTYALLYGAFAFDKGDGLQLHYVLLAWVLSLTAQFKSKPSVIFLALCTGVFIQGFGAYRLRFLCQVFGNYGNGFGQP 276
            MV+NPPVLKQ   D E+PV VTV+PARSGDAYIEQAKRAAAW+GLLL+CWL QRLMCHF LPP CDLP DALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFG+VIIVI L +S IET+ WFQDMRF  N DW +SHI  AV+LIT VLV V YHFAEAWRTLPGAYYVSGNINL+IVI+ENLHRIYNVSRGLI++YALLYGAFAF++GDGL+ HYVLLAWVLSLTAQFKSKPS+I+LALCTGVFIQGFG+YRLRFLC+VFGNYGNGFG P
Sbjct:    1 MVFNPPVLKQDADDAEKPVKVTVSPARSGDAYIEQAKRAAAWIGLLLLCWLFQRLMCHFNLPPHCDLPSDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGIVIIVIGLIVSAIETTDWFQDMRFNDNSDWRDSHIVMAVVLITFVLVIVAYHFAEAWRTLPGAYYVSGNINLDIVIEENLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFGSYRLRFLCEVFGNYGNGFGVP 278          
BLAST of mRNA_L-elsbetiae_contig526.13386.1 vs. uniprot
Match: D8LDF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 2.280e-69
Identity = 127/261 (48.66%), Postives = 167/261 (63.98%), Query Frame = 0
Query:    1 MVYNPPVLKQADGEE----PVVVT--VNPARSGDAYIEQAKRAAAWMGLLLICWLLQRLMCHFGLPPSCDLPRDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGVVIIVIALALSGIETSRWFQDMRFKPNEDWTESHITFAVILITIVLVFVGYHFAEAWRTLPGAYYVSGNINLNIVIKENLHRIYNVSRGLILTYALLYGAFAFDKGDGLQLHYVLLAWVLSLTAQFKSKPSVIFLALCTGVFIQGFG 255
            MVYNPPV +  DGE      V +T  VNP R G AY+EQA RA  W  + ++ WLL RL C+ GLP  C+LP + LEVLT LL LLVF L QAWFCE++EERRFR L  + YF ++++  ALALSG+  +   ++   +   D T   +   +IL+ + +V +  HFAEAW+ LPGA+ +SG     + ++E+L  IY  SR LIL Y +LY AF+  + DG      LLAWVLSL AQFKS  SV +LA+ TGVF+QG G
Sbjct:    1 MVYNPPVERGEDGEPIKDGGVALTHPVNPMRRG-AYVEQATRATGWAVMYILGWLLMRLSCYAGLPGDCNLPDEPLEVLTVLLVLLVFSLAQAWFCEIMEERRFRDLASKVYFPLLMVGAALALSGLSRAESLRNSLQEERRDLTTFQVAIFIILLILTVVVLLLHFAEAWKVLPGAHLISGVGVPRVEVREDLLSIYVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIG 260          
BLAST of mRNA_L-elsbetiae_contig526.13386.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 1.370e-48
Identity = 105/239 (43.93%), Postives = 139/239 (58.16%), Query Frame = 0
Query:   30 YIEQAKRAAAWMGLLLICWLLQRLMCHFGLPPSCDLPRDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAY-FGVV----IIVIALA-LSGIETSRWFQDMRFKPNEDWTESHITFAVILITIVLVFVGYHFAEAWRTLPGAYYVSGNINLNIVIKENLHRIYNVSRGLILTYALLYGAFAFDKGDGLQLHYVLLAWVLSLTAQFKSKPSVIFLALCTGVFIQGFGAYRLRFL 262
            Y  Q KRA  W  L  + W+LQRL CH GLP  CDL    L+VLTDL+ L  F L QA++CE+L + RF  L +  + FGV+    II+ AL  + G+E  RW +D   K  E        F   LI  VL+ V +HFA AW TLPG   +SG + +    KE+LH IY+ SR +I+ + +L+ +F   + DG      LLAW+LSL A F    S I+L + TG+F+QG GA RLRFL
Sbjct:    4 YEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLE--RWDKDNEGKDFEFSALRSTIFVFGLIAAVLL-VAWHFARAWLTLPGMQLLSGGVKVEPP-KEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 238          
BLAST of mRNA_L-elsbetiae_contig526.13386.1 vs. uniprot
Match: A0A812QSQ8_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QSQ8_SYMPI)

HSP 1 Score: 60.5 bits (145), Expect = 6.440e-7
Identity = 65/234 (27.78%), Postives = 102/234 (43.59%), Query Frame = 0
Query:   38 AAWMGLLLICWLLQRLMCHFGLPPSCDLPRDALEVLTDLLALLVFGLTQAWFCEV-LEER-----RFRHLTREAYFGVVIIVIALALSGIETSRWFQDMRFKPNEDWTES----HITFAVILITIVLVFVGYHFAEAWRTLPGAYYVSGNINLNIVIKENLHRIYNVSRGLILTYALLYGAFAF----DKGDGLQLHYVLLAWVLSLTAQFKSKPSVIFLALCTGVFIQGFGAY 257
            A W  LLL+ +++ R++C FG+P  C      LEV+ D   +L+ G   A    V L +R     RFR   R   F  V I++    +     R  +  R      W  S     +  A+ +       + +HF  A++  P    +SG +             Y  SR   L+  L YG + F      G  + LH+ ++ ++++L A+F    S+I LA  TGVF+QG  AY
Sbjct:   39 AVWFLLLLLQYIVVRVVCQFGVPQDCHPDTHLLEVVYDFQIMLIMGFMLAILTGVHLPDRSAYLFRFRR-PRPRGFAFVGIMLLSGPAWGSLDRVEELSRISFTTGWFRSGGAKSVCIALAIFAAAFGLLLWHFVCAFKHNP----LSGFLA------------YCCSR---LSIWLFYGFYLFVASQTAGVYVHLHHYIVGFLVALLAEFNHPISLILLAAGTGVFVQGISAY 252          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig526.13386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1P1_ECTSI5.640e-16883.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDF2_ECTSI2.280e-6948.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDF3_ECTSI1.370e-4843.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812QSQ8_SYMPI6.440e-727.78Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 122..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 163..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..211
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 260..311
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 212..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..121
NoneNo IPR availableTMHMMTMhelixcoord: 192..211
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 142..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig526contigL-elsbetiae_contig526:14848..20514 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig526.13386.1mRNA_L-elsbetiae_contig526.13386.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig526 14757..21367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig526.13386.1 ID=prot_L-elsbetiae_contig526.13386.1|Name=mRNA_L-elsbetiae_contig526.13386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MVYNPPVLKQADGEEPVVVTVNPARSGDAYIEQAKRAAAWMGLLLICWLL
QRLMCHFGLPPSCDLPRDALEVLTDLLALLVFGLTQAWFCEVLEERRFRH
LTREAYFGVVIIVIALALSGIETSRWFQDMRFKPNEDWTESHITFAVILI
TIVLVFVGYHFAEAWRTLPGAYYVSGNINLNIVIKENLHRIYNVSRGLIL
TYALLYGAFAFDKGDGLQLHYVLLAWVLSLTAQFKSKPSVIFLALCTGVF
IQGFGAYRLRFLCQVFGNYGNGFGQPGSGFGGSTRYDGEGSASFDSPDSV
SLDSGDSQDSG*
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