prot_L-elsbetiae_contig524.13357.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig524.13357.1
Unique Nameprot_L-elsbetiae_contig524.13357.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length655
Homology
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BLAST of mRNA_L-elsbetiae_contig524.13357.1 vs. uniprot
Match: D8LJV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV9_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 3.030e-49
Identity = 134/228 (58.77%), Postives = 150/228 (65.79%), Query Frame = 0 
Query:    1 MQKRRSALRNWRSASYDHALVLVGAAQLPRKTLAEAAKMPGAVWVDRHQLGEPCSLPLEVKTVLAKSLAAQMPTCASCDDNEIGRDFVLLMTFDSSEGKVAAVTRLAELGVDTSGFHSSFRVEVEHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPAPRTAESAKSEPIAA-VPAPAATVEPTLQAAAAPSRAMIAREKALKALERERLIAVAAAKA 227
            +QK+RSALRNWRSA Y++ALVLVGAA LPRK LA A+K+PGAVWVDRH+LGEP SLPLEVK+VLAKSLAAQ PTCASCDDNE GRDF+LLMTF+ SE K  AV RLAELGV+TS F++S R++VEHA      XXXXXXXX                         PA     SAKS   A                     R M+AREKALKALE ERLIA AA KA
Sbjct:  552 LQKQRSALRNWRSAPYNYALVLVGAALLPRKALAGASKLPGAVWVDRHELGEPYSLPLEVKSVLAKSLAAQTPTCASCDDNEAGRDFLLLMTFECSEDKAVAVARLAELGVETSKFNNSPRIQVEHARASPTPXXXXXXXXPAVSEWSSS--------------SAPAEAMVGSAKSGVAATGXXXXXXXXXXXXXXXXXXXRVMLAREKALKALEGERLIAAAATKA 765
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BLAST of mRNA_L-elsbetiae_contig524.13357.1 vs. uniprot
Match: A0A6H5KA42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA42_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 2.000e-48
Identity = 147/230 (63.91%), Postives = 160/230 (69.57%), Query Frame = 0 
Query:    1 MQKRRSALRNWRSASYDHALVLVGAAQLPRKTLAEAAKMPGAVWVDRHQLGEPCSLPLEVKTVLAKSLAAQMPTCASCDDNEIGRDFVLLMTFDSSEGKVAAVTRLAELGVDTSGFHSSFRVEVEHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPAPRTAESAKSEPIAAVPAPAATVEPTLQAAAAPSRAMIAREKALKALERERLIAVAAAKARAA 230
            +QK+RSALRNWRSA Y++ALVLVGAA LPRK LA A+K+PGAVWVDRH+LGEP SLPLEVK VLAKSLAAQ PTCASCDDNE GRDF+LLMTF  SE K  AV RLAELGV+TS F +S R++VEHA        XXXXXXXXXXXXXXXXXXXXXX     XX                                     R M+AREKALKALERERLIA AA KARAA
Sbjct:  872 LQKQRSALRNWRSAPYNYALVLVGAALLPRKALAGASKLPGAVWVDRHELGEPYSLPLEVKPVLAKSLAAQTPTCASCDDNEAGRDFLLLMTFKCSEDKAVAVARLAELGVETSKFDNSPRIQVEHARASSAPSPXXXXXXXXXXXXXXXXXXXXXXKSGVAXXXXXXXXXXXXXXXXXXXXX-----------------XRVMLAREKALKALERERLIAAAATKARAA 1084
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig524.13357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJV9_ECTSI3.030e-4958.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA42_9PHAE2.000e-4863.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 619..654
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..655
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig524contigL-elsbetiae_contig524:28902..33077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig524.13357.1mRNA_L-elsbetiae_contig524.13357.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig524 28902..33077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig524.13357.1 ID=prot_L-elsbetiae_contig524.13357.1|Name=mRNA_L-elsbetiae_contig524.13357.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=655bp
MQKRRSALRNWRSASYDHALVLVGAAQLPRKTLAEAAKMPGAVWVDRHQL
GEPCSLPLEVKTVLAKSLAAQMPTCASCDDNEIGRDFVLLMTFDSSEGKV
AAVTRLAELGVDTSGFHSSFRVEVEHASASAASPPPPPPPPPPPSRPASS
PSPQAAAVAAVTTTETPAPRTAESAKSEPIAAVPAPAATVEPTLQAAAAP
SRAMIAREKALKALERERLIAVAAAKARAAVIKAREAGVEKSAKVDGEPA
ARAKSSGAAKAKSSRAARVNTGSASGGAKTAPKRIGSSGEAAAPAPAPAV
TVRAPAAITAPAPATAPAVTAGAKPKPLLDSAQGRATTTIPKRPPATASR
LADKAKRSAATATKPAAAKSGTKTADAPVARRSTSPAPPAGVRAPSPTKP
APAPPRRAVSSICRSNEAATTATKLAAAKSGTKTADAPAARRSTSPAPPA
GVRAPSPTKPAPAPPRRAVSPICRSNEAATTATKPAAAKSGTKTADTPAA
RRSTSPAPPAGVRAPSPTKPTKPAPAAAPAPAPPRRAVSPICRSNGAAGP
PAPPLKSRGTRLVVRRPAGPPDPTLRPWPYSFSGDYFKLLERGPNMRGAC
DPSKNASYVGVVLPTEAVVAGFKAERESQQRRRQQQQQRQLQEQQRQQQQ
QQQRQ
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