prot_L-elsbetiae_contig524.13353.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig524.13353.1
Unique Nameprot_L-elsbetiae_contig524.13353.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: D8LJV8_ECTSI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV8_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.290e-43
Identity = 73/82 (89.02%), Postives = 80/82 (97.56%), Query Frame = 0
Query:    1 MASLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQARLNDRGNY 82
            MASLRREVLGGYRRLMRVR++AF+DD+T+LEASKQQLR EFNKNK +TDPSKIAGLIKGINEVE+MLKYNIAQARLNDRGNY
Sbjct:    1 MASLRREVLGGYRRLMRVRVVAFEDDTTMLEASKQQLRIEFNKNKAVTDPSKIAGLIKGINEVEEMLKYNIAQARLNDRGNY 82          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A6H5K8N1_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N1_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.450e-36
Identity = 73/112 (65.18%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    1 MASLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIA------------------------------GLIKGINEVEDMLKYNIAQARLNDRGNY 82
            MASLRREVLGGYRRLMRVR++AFKDD+T+LEASKQQLR EFNKNK +TDPSKI                               GLIKGINEVEDMLKYNIAQARLNDRG+Y
Sbjct:    1 MASLRREVLGGYRRLMRVRVVAFKDDTTMLEASKQQLRIEFNKNKAVTDPSKIGQQHSRARGSLDRLYRMESACQIADRFLHVPGLIKGINEVEDMLKYNIAQARLNDRGHY 112          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A4D9D3L3_9STRA (Complex1_LYR_dom domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3L3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.330e-18
Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    3 SLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQARLNDRGNY 82
             L+  VLGGYRRL+R+RL  F+ D   ++ ++ QLRTEFNK++ + D  ++ GL+ GI EVE+M   NI Q RLN+ GNY
Sbjct:   15 GLKNSVLGGYRRLLRLRLRVFQGDQYAMDQARLQLRTEFNKHRHVQDHRELEGLVAGIREVEEMFSENIVQGRLNEAGNY 94          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A835YM21_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM21_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.450e-18
Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    3 SLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQARL 76
            ++R  V+ GYR L+R RL+ FKDD   + ASK +L+ EF KNK +TD +K+A L+KGI EV+ ML +N+ Q R+
Sbjct:    2 AMRSRVMAGYRSLLRTRLVVFKDDDRAIRASKMKLKEEFMKNKNVTDANKLASLLKGIEEVQQMLLHNVVQVRI 75          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A7S1U0R5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0R5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.990e-16
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 MASLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQARLNDRGNY 82
            MA+ R + L G+RRL+R R + F+ D+  L AS+ +LR++F  N+  TD +KIA +++GI+EVEDM+  N  Q  LN++GNY
Sbjct:    1 MAATRLQALHGFRRLLRARKVLFRGDANALAASQLELRSQFQTNRHETDAAKIAEMLRGIDEVEDMMLNNFVQGELNEQGNY 82          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A6G0WSM7_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSM7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.140e-12
Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    3 SLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQARLNDRGNY 82
            S+R +VLGGYRRL+R     F  D   +  + + +R  F +N+ + D S + GLIKGI+E E ML YNI Q + N++G Y
Sbjct:    5 SVRAQVLGGYRRLIRASRQTFGADKRAVVEAHKAVRAAFLENRDVKDVSALQGLIKGIDEAESMLLYNIVQGQANEQGTY 84          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A7S2S7M8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7M8_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.470e-12
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    2 ASLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQARLNDR-GNY 82
            ++L   V  GYRRL R R + F  D   +  SK  LRTEF+KN+ +TDP+ + GL+  ++E EDML + I +  LN   GNY
Sbjct:    3 STLTARVFSGYRRLFRARGVVFIGDQRAMAESKIALRTEFDKNRSVTDPATLEGLLTMVDEAEDMLLHGIVRGDLNQSSGNY 84          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A3M6VHL4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHL4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.580e-11
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    3 SLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQAR 75
            S+RR+VLGGYRRL+R    AF+DD+  L+ +   LR  F  N  +TD  ++  L+KGI+E E ML ++I Q R
Sbjct:    2 SIRRQVLGGYRRLLRASRQAFRDDAYALQQAHLTLRQNFIDNCQVTDKKQLDELVKGIDEAEGMLLHHIVQGR 74          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: A0A1V9YYX3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYX3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.390e-11
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    3 SLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQARLNDRGNY 82
            SLR + L GYR L+R    AF+ D   ++ +++ +R  F +N+  TD   IA ++KGI E E ML++NI Q + N+ G+Y
Sbjct:    2 SLRSQALWGYRSLIRASEQAFRGDVYAIKEARKAIRAAFVENRRETDTETIAAMVKGIEEAESMLRFNIVQGKKNEAGSY 81          
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Match: H3GET2_PHYRM (Complex1_LYR_dom domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GET2_PHYRM)

HSP 1 Score: 62.8 bits (151), Expect = 1.010e-10
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    3 SLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDPSKIAGLIKGINEVEDMLKYNIAQAR 75
            S+R +VLGGYRRL+R    AF+ D+  L+ ++  LR  F  N+ + D  ++ GL+KGI+E E ML ++I Q R
Sbjct:    2 SVRVQVLGGYRRLLRASRQAFRGDAYALQQARAALRENFVANRDVNDSEQLDGLVKGIDEAEGMLLHHIVQGR 74          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig524.13353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJV8_ECTSI1.290e-4389.02Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A6H5K8N1_9PHAE4.450e-3665.18Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A4D9D3L3_9STRA2.330e-1850.00Complex1_LYR_dom domain-containing protein n=3 Tax... [more]
A0A835YM21_9STRA2.450e-1850.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S1U0R5_9STRA1.990e-1646.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6G0WSM7_9STRA2.140e-1243.75Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S2S7M8_9STRA3.470e-1243.90Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A3M6VHL4_9STRA3.580e-1146.58Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A1V9YYX3_9STRA6.390e-1140.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
H3GET2_PHYRM1.010e-1043.84Complex1_LYR_dom domain-containing protein n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 6..60
e-value: 4.8E-9
score: 36.1
NoneNo IPR availablePANTHERPTHR46749FAMILY NOT NAMEDcoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig524contigL-elsbetiae_contig524:22167..22950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig524.13353.1mRNA_L-elsbetiae_contig524.13353.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig524 22167..22950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig524.13353.1 ID=prot_L-elsbetiae_contig524.13353.1|Name=mRNA_L-elsbetiae_contig524.13353.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
MASLRREVLGGYRRLMRVRLIAFKDDSTVLEASKQQLRTEFNKNKGITDP
SKIAGLIKGINEVEDMLKYNIAQARLNDRGNY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR