prot_L-elsbetiae_contig5209.13308.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5209.13308.1
Unique Nameprot_L-elsbetiae_contig5209.13308.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length346
Homology
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BLAST of mRNA_L-elsbetiae_contig5209.13308.1 vs. uniprot
Match: D7FZI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 5.820e-8
Identity = 127/376 (33.78%), Postives = 146/376 (38.83%), Query Frame = 0 
Query:    3 LELSRISEGETSRIAES-----GVDGGGGRXXXXVGSHELSSASPLHADEGGXXXXXXXXXXXXAEAAAGCAASRTGWLRPRTPGXXXXXXXXXXXXXXXXXXDFGEPLNSRQSLGSSWGGCSTIKRR-GEDLTGGGLGLRPLGDGDGEDADAGADAVGGFDYTRGMEEEAADEEGGTEGRFVARGXXXXXRASTXXXXXIXXAGGA--GIGIAASRWNSRRSSSSGXXSVGA----AAGDFSLGSIGGXXXXXXGVTPLPAGRGGA-HSAGT-----------------GRGGRSGGVPGVAAGTAPGEAGGPITEDGGAXXXXXXXXXXASGGRASYHSLCFSSSSSGSATT--PHS-SLSAS-PF-RLLDGDE 343
            L LSRISEG    I+ S     G   G GR       +  SS   L  D+               E   G + SR GWLRPRTP        XXXXXX           +SRQSLGS+WGGCSTIKRR G+D +G G               + A   G  +   G   +  + E  T G   A   XXXX             G    G G+  SRW++ R S   XX        A G+ S+           GVTPLPAGRGG    AG                  GR GR+G   G                               SGGRA YHSLCFSS          PHS SLSAS PF  LLDG +
Sbjct:   43 LGLSRISEGGGGEISRSTERIRGSSSGDGREDQAASDNVSSS---LMFDDN---------DSSDGEGLDGYSVSRAGWLRPRTPAGATNGRGXXXXXX----------XSSRQSLGSTWGGCSTIKRRPGDDDSGAGW--------------SSARRRGALNTGLGHHHQDVEGEDSTRGVVGAERSXXXXXXXXSGTDGFATEGSMYPGAGVGGSRWSNGRKSXXXXXXXXXXXSFAVGEASVARPVAATFGCDGVTPLPAGRGGGPREAGAXXXXXXXXXXXXXXXSAGREGRAGXXXGEG----------------------------VSGGRADYHSLCFSSXXXXXXXXXXPHSGSLSASSPFLNLLDGGD 354
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5209.13308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZI8_ECTSI5.820e-833.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5209contigL-elsbetiae_contig5209:2238..3428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5209.13308.1mRNA_L-elsbetiae_contig5209.13308.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5209 2103..3841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5209.13308.1 ID=prot_L-elsbetiae_contig5209.13308.1|Name=mRNA_L-elsbetiae_contig5209.13308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp
MLLELSRISEGETSRIAESGVDGGGGRGGDGVGSHELSSASPLHADEGGE
THGNAGGDDHGAEAAAGCAASRTGWLRPRTPGGGGGGGGANGLLSGGGGG
DFGEPLNSRQSLGSSWGGCSTIKRRGEDLTGGGLGLRPLGDGDGEDADAG
ADAVGGFDYTRGMEEEAADEEGGTEGRFVARGGGGGGRASTGGRASIGGA
GGAGIGIAASRWNSRRSSSSGGGSVGAAAGDFSLGSIGGGAGAGGGVTPL
PAGRGGAHSAGTGRGGRSGGVPGVAAGTAPGEAGGPITEDGGAGAGAGAG
TGTASGGRASYHSLCFSSSSSGSATTPHSSLSASPFRLLDGDESA*
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