prot_L-elsbetiae_contig52.13286.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig52.13286.1
Unique Nameprot_L-elsbetiae_contig52.13286.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
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BLAST of mRNA_L-elsbetiae_contig52.13286.1 vs. uniprot
Match: D7FNC2_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC2_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.630e-10
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:   94 HETDDISDILGVGLGGLPTLSSSGQLSVLSASAVEFTPGG 133
            HETDDISDIL VGLGGLPTLS+SGQLS+LSASA EF PGG
Sbjct:   31 HETDDISDILNVGLGGLPTLSASGQLSILSASAQEFKPGG 70
[Close]
BLAST of mRNA_L-elsbetiae_contig52.13286.1 vs. uniprot
Match: A0A6H5JKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG2_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 3.080e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0 
Query:   94 HETDDISDILGVGLGGLPTLSSSGQLSVLSASAVEFTPGGQ 134
            HETDDISDIL VGLGGLPTLS+ GQLS+LSASA EF PGGQ
Sbjct:   31 HETDDISDILNVGLGGLPTLSALGQLSILSASAQEFKPGGQ 71
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig52.13286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNC2_ECTSI1.630e-1087.50C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JKG2_9PHAE3.080e-1085.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig52contigL-elsbetiae_contig52:16743..21526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig52.13286.1mRNA_L-elsbetiae_contig52.13286.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig52 16742..21526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig52.13286.1 ID=prot_L-elsbetiae_contig52.13286.1|Name=mRNA_L-elsbetiae_contig52.13286.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
VLFPLSRQRVTLPIEGSGVSLPAGTLSRHSQPRLMSSWSPWDTGAGSESV
AALDSSRGTSHGPAGASADGGVGPGAAGEASACGSSDGSACARHETDDIS
DILGVGLGGLPTLSSSGQLSVLSASAVEFTPGGQQGQQGQDRLLLEAEGG
GGQTAAGVGVEGQGEGGGGEDGMFYAEMQLEA
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