prot_L-elsbetiae_contig5193.13278.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5193.13278.1
Unique Nameprot_L-elsbetiae_contig5193.13278.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: D8LEX7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX7_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.100e-54
Identity = 86/113 (76.11%), Postives = 95/113 (84.07%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVEAKATCCDRIFRSASSRLGLNLVAPNNVLFSSSRRTYTAEDHQHVMGPTLPAAYGRSEMDYVGSAVAPRQGSTDIEAG 113
            DELR+IP C H FHK+CIDPWLETKAVCAYCK  VEA+ TCCDR++RS S RLG+NLVAP  + FSSSRRTYT ED Q  MGPTLPA+YG SEMDYVGSAVAPRQ S D+EAG
Sbjct:  207 DELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAG 319          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: A0A6H5KYP0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP0_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.130e-53
Identity = 87/113 (76.99%), Postives = 96/113 (84.96%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVEAKATCCDRIFRSASSRLGLNLVAPNNVLFSSSRRTYTAEDHQHVMGPTLPAAYGRSEMDYVGSAVAPRQGSTDIEAG 113
            DELR+IP C H FHK+CIDPWLETKAVCAYCK  VEA+ TCCDRI+RS S+RLG+NLVAP  + FSSSRRTYT ED Q  MGPTLPA+YG SEMDYVGSAVAPRQ S D+EAG
Sbjct:  400 DELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSNRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAG 512          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.280e-7
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTV 35
            D+LRV+P C H +HK C+DPWLETKA+C  CK  V
Sbjct:  262 DQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRV 296          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: A0A836C7Z7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.100e-7
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTV 35
            D LRV+P C HH+HK C+DPWLE++ +C  CK  V
Sbjct:  132 DVLRVVPRCNHHYHKACLDPWLESRGICPLCKQLV 166          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: A0A8J5G125_ZINOF (RING-type domain-containing protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5G125_ZINOF)

HSP 1 Score: 55.8 bits (133), Expect = 1.600e-6
Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVEAKAT 40
            DELR++PAC H FH  C+DPWL +   C  C+T++   AT
Sbjct:  150 DELRLLPACRHAFHSQCVDPWLRSAPSCPLCRTSITLPAT 189          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: B4FM78_MAIZE (E3 ubiquitin-protein ligase ATL6 n=2 Tax=Zea mays TaxID=4577 RepID=B4FM78_MAIZE)

HSP 1 Score: 55.1 bits (131), Expect = 3.030e-6
Identity = 23/39 (58.97%), Postives = 26/39 (66.67%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVEAKA 39
            DELRV+PAC H FH DCIDPWL   A C  C+  + A A
Sbjct:  158 DELRVLPACCHVFHPDCIDPWLAGAATCPLCRADLTAAA 196          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: C0HE73_MAIZE (E3 ubiquitin-protein ligase ATL6 n=3 Tax=Zea mays TaxID=4577 RepID=C0HE73_MAIZE)

HSP 1 Score: 54.3 bits (129), Expect = 5.720e-6
Identity = 28/59 (47.46%), Postives = 31/59 (52.54%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVEAKATCCDRIFRSASSRLGLNLVA 59
            DELRV+PAC H FH DCIDPWL     C  C+  + A A        S  S  G NL A
Sbjct:  162 DELRVLPACCHVFHPDCIDPWLAGAVTCPLCRADLTAAAAPYYPPASSDGSGSGSNLAA 220          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: A0A2T7EV59_9POAL (RING-type domain-containing protein n=4 Tax=Panicum TaxID=4539 RepID=A0A2T7EV59_9POAL)

HSP 1 Score: 53.1 bits (126), Expect = 6.930e-6
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKA-VCAYCKTTVEAKA 39
            +E+RV+PAC H FH++C+D WL T+A  C  C+ TV A+A
Sbjct:  138 EEVRVLPACRHGFHRECVDRWLLTRAPTCPVCRATVAARA 177          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: K4ABQ5_SETIT (RING-type domain-containing protein n=2 Tax=Setaria TaxID=4554 RepID=K4ABQ5_SETIT)

HSP 1 Score: 53.9 bits (128), Expect = 7.680e-6
Identity = 26/58 (44.83%), Postives = 31/58 (53.45%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVE------AKATCCDRIFRSASSR 52
            DELRV+PAC H FH DCIDPWL+    C  C+  +       A A  CD   R  + R
Sbjct:  152 DELRVLPACCHVFHPDCIDPWLDGAVTCPLCRADLTVAPPPAAPAESCDLTARQGAVR 209          
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Match: ATL31_ORYSJ (E3 ubiquitin-protein ligase Os03g0188200 n=10 Tax=Oryza TaxID=4527 RepID=ATL31_ORYSJ)

HSP 1 Score: 53.5 bits (127), Expect = 1.040e-5
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 0
Query:    1 DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVEA 37
            DELRV+PAC H FH DCIDPWL     C  C+  + A
Sbjct:  144 DELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTA 180          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5193.13278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEX7_ECTSI1.100e-5476.11RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KYP0_9PHAE1.130e-5376.99RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZK41_9STRA1.280e-762.86RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836C7Z7_9STRA2.100e-757.14RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8J5G125_ZINOF1.600e-650.00RING-type domain-containing protein n=2 Tax=Zingib... [more]
B4FM78_MAIZE3.030e-658.97E3 ubiquitin-protein ligase ATL6 n=2 Tax=Zea mays ... [more]
C0HE73_MAIZE5.720e-647.46E3 ubiquitin-protein ligase ATL6 n=3 Tax=Zea mays ... [more]
A0A2T7EV59_9POAL6.930e-652.50RING-type domain-containing protein n=4 Tax=Panicu... [more]
K4ABQ5_SETIT7.680e-644.83RING-type domain-containing protein n=2 Tax=Setari... [more]
ATL31_ORYSJ1.040e-556.76E3 ubiquitin-protein ligase Os03g0188200 n=10 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 7..32
e-value: 5.1E-7
score: 29.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..37
e-value: 1.0E-10
score: 43.0
NoneNo IPR availablePANTHERPTHR46913FAMILY NOT NAMEDcoord: 1..50
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5193contigL-elsbetiae_contig5193:3130..4634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5193.13278.1mRNA_L-elsbetiae_contig5193.13278.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5193 3130..4634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5193.13278.1 ID=prot_L-elsbetiae_contig5193.13278.1|Name=mRNA_L-elsbetiae_contig5193.13278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
DELRVIPACEHHFHKDCIDPWLETKAVCAYCKTTVEAKATCCDRIFRSAS
SRLGLNLVAPNNVLFSSSRRTYTAEDHQHVMGPTLPAAYGRSEMDYVGSA
VAPRQGSTDIEAGGAGAVAEAGSGEAATAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD