prot_L-elsbetiae_contig5192.13277.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5192.13277.1
Unique Nameprot_L-elsbetiae_contig5192.13277.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length848
Homology
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE)

HSP 1 Score: 758 bits (1956), Expect = 2.350e-262
Identity = 503/842 (59.74%), Postives = 560/842 (66.51%), Query Frame = 0
Query:   16 MCASAPPAEGFTPPGCLARLCAAGDGFYAAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEEDLAVDITPSPGRQPLPGMPMDMRDDSEFYIEMERKRAAGPTYNRDRDMPGLGQVM-RRTGKRGGRRSGAG---DALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPKSIRSKSSMAGDKGTAEMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPPSATIEAAREAVSEAEAAAKRNEVALTHQRLGTTPGGTGAAAAEMA--SELQLILGARAKEKEAARLLREGGGIGEGEEEDGGLPRHHQPLLDVGLG---GGXXXXXXXEGVGVAGELLRXXXXXXXXXXXXXXXXXXXXXNAFEFEDEFATALEEKFDXXXXXXXXXXIAAAVFGSDGSRGXXXXXXXXXGQAGASMDAVRTLNKAWTNTASRSPRDAADQLAMMGASAAPRLPEDDEQQLLSTLDSFDILVDGDEXXXXXXXXXXXXXGRHESESAEPLDRLQSEMK 848
            MCASAPPAEGFTPP CLAR+C AGD FY+AER                                                                                                                  E+L   + P P +  LPGMP DMRDDSEFY+EMERK+ AGPTY RD DM GLG+V  +++ KR G         DAL  YLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLM G  P+ EEWA+ALGM+  EL +EL+RA+KAK AMLAANLRLVVSVAKRYR+Q L+FQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSR+IRLPVHVHDFLNRVRK T+EMTDKNGKLPTDE+LA HLE + VRIQYYRDAA+ATLSME+P++I SK+S +  K   EMGQGVSGP+K TPDK+A S VMKQK+TELLMTLS+REQE+VKARFGLGG LPRTLEEVG DFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPP   I+AAR+AV+EAEAAAKRNEVAL HQR+GT PGG G  A ++   SELQ I+G++ KE     L  + GG GE            +PLLDVGL    GG        G      LLR     XXXXXXXXXXXXXXX  AF FEDEFA        XXXXXXXXXX+AAAVFGSDG  G              SMDAVRTLNKAWTNTA+ SPR+AADQL+MMG   APR  +++EQQLLSTLDS ++L D D+             G   SES E +DRLQ+EMK
Sbjct:    1 MCASAPPAEGFTPPVCLARVCGAGDAFYSAERRLAAGSGAGRDGGSGGRRGTMRGREAAAAPVARGALPAPPTRRRSTAARWMIQHPAPSRSAATRMMSAAVAAEPV---------------------------------------EELDT-LRPPPPQ--LPGMPFDMRDDSEFYLEMERKKEAGPTYTRDSDMVGLGKVSTKKSAKRDGXXXXXXXXXDALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPTEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDEELAEHLEVSAVRIQYYRDAAQATLSMEAPRTIASKTSTSPGK-KVEMGQGVSGPEK-TPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPPKGAIKAARQAVAEAEAAAKRNEVALVHQRMGTAPGG-GKPAGDVGITSELQSIVGSKGKE-----LGEKEGGWGELSSSS-----RQEPLLDVGLSVGAGGASVGRRPRGRPANEMLLRKRLRQXXXXXXXXXXXXXXX--AFLFEDEFAXXXXXXXXXXXXXXXXXXLAAAVFGSDGKSGSRGGK--------VSMDAVRTLNKAWTNTANSSPREAADQLSMMGV--APRSADEEEQQLLSTLDSLNLLDDDDDVGGRA--------GAGVSESKEAMDRLQNEMK 767          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI)

HSP 1 Score: 731 bits (1888), Expect = 1.400e-253
Identity = 465/674 (68.99%), Postives = 515/674 (76.41%), Query Frame = 0
Query:  184 MRDDSEFYIEMERKRAAGPTYNRDRDMPGLGQVM-RRTGKRGGRRSGAGDALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPKSIRSKSSMAGDKGTAEMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPPSATIEAAREAVSEAEAAAKRNEVALTHQRLGTTPGGTGAAAAEMA--SELQLILGARAKEKEAARLLREGGGIGEGEEEDGGLPRHHQPLLDVGLG---GGXXXXXXXEGVGVAGELLRXXXXXXXXXXXXXXXXXXXXXNAFEFEDEFATALEEKFDXXXXXXXXXX---IAAAVFGSDGSRGXXXXXXXXXGQAGASMDAVRTLNKAWTNTASRSPRDAADQLAMMGASAAPRLPEDDEQQLLSTLDSFDILVDGDEXXXXXXXXXXXXXGRHESESAEPLDRLQSEMK 848
            MRDDSEFY+EMERK+ AGPTY RD DM GLG+V  R+T KR G   G GDAL  YLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLM G  PS EEWA+ALGM+  EL +EL+RA+KAK AMLAANLRLVVSVAKRYR+Q L+FQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSR+IRLPVHVHDFLNRVRK T+EMTDKNGKLPTD++LA HLE + VRIQYYRDAA+ATLSME+P++I SK+S +  K   EMGQGVSGP+K TPDK+A S VMKQK+TELLMTLS+REQE+VKARFGLGG LPRTLEEVG DFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPP   I+AAR+AV+EAEAAAKRNEVAL HQR+GT PGG G  A ++   SELQ ILG++ KE E  +         EG   +       QPLLDVGL    GG        G      LLR  XXXXXXXXXXXXXXXXXXX                  XXXXXXXXXX   +AAAVFGS+G  G              SMDAVRTLNKAWTNTA+ SPR+AADQL+MMG   APR  +++EQQLLSTLDS ++L D D+             G   SES E +DRLQ+EMK
Sbjct:    1 MRDDSEFYLEMERKKEAGPTYTRDSDMVGLGKVSTRKTAKRDGS-GGGGDALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPSEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDDELAEHLEVSAVRIQYYRDAAQATLSMEAPRNIASKTSTSPGK-KVEMGQGVSGPEK-TPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPPKGAIKAARQAVAEAEAAAKRNEVALVHQRMGTAPGG-GKPAGDVGITSELQSILGSKGKEPEEEK---------EGSWGELSSSSRQQPLLDVGLSVGAGGASVGRRPRGRPANEMLLRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAVFGSEGKSGSRGGK--------VSMDAVRTLNKAWTNTANSSPREAADQLSMMGV--APRSADEEEQQLLSTLDSLNLLDDDDDVGGRA--------GAGVSESKEAMDRLQNEMK 643          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A6H5KA31_9PHAE (RNA_pol_sigma70 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA31_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 4.010e-97
Identity = 188/349 (53.87%), Postives = 240/349 (68.77%), Query Frame = 0
Query:  234 LQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARAT--LSMESPKSIRSKSSMAGDKGTAEMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLDQMLVQAGVLGPPSATIEAAREAVSEAE 580
            L  Y +T+ K+ LLKP EE+VLGRQIQ+G+  E  RD L+  HG  PS EEWA  L +   EL RELA A +AK  M++ANLRLVVS+A+ YR + L F DLIQEGT GLVKA EKF+PE GF+F TYA WWIK+SI+ GIA+QSRVIRLP  VH FL+ +RK T E+T  +G++PTDE+L   L  TV +IQ+YR AA  T  +S+++  S +     A D GT    +    P+ AT      +  MK K+T LL TL  REQ++V+AR+GL G   +TLEE+G D  LTRERVRQIE++AL KLRQPYRNYRVR+ K+ Q+ V AG+  P S  + AAR  ++EAE
Sbjct:  240 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELT-VDGRVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASNKVSDGAADDLGTQIGEKSTPNPEDAT-----QAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAE 582          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA)

HSP 1 Score: 315 bits (806), Expect = 1.340e-96
Identity = 173/328 (52.74%), Postives = 230/328 (70.12%), Query Frame = 0
Query:  228 SGAGDALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPKSIRS-KSSMAGDKGTAEMGQGVSGPD-KATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLD 553
            SG    LQ   + +  +DLLKP EEI L RQI+ G+ +E  R+ L +     PS  EWA  +G++   L   + R+A+AKS M++ANLRL VS+AKRYR + L   DLIQEG+FGL+KAAE+FDPE+GFKFSTYATWWIKQSIMR IADQSR IRLPVHVHDFLN V++ T E++ + G+ PTDE+LA+ L+ T  +I +YRDAA++ LSME  ++  S K S A   G ++M    S  D +  P+ +    ++K+ + +LL TLS REQE+V+ RFGL     RTLEE+G  F +TRERVRQIE+RAL KLRQPYRN+++R +  +
Sbjct:   11 SGQPSQLQHLFKRMTSIDLLKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAKRYRRRGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLELGRHPTDEELAMRLQVTAQKIVFYRDAAQSVLSMEQSRNFASRKGSGASQGGKSDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAYAFE 338          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 310 bits (794), Expect = 3.950e-94
Identity = 164/327 (50.15%), Postives = 232/327 (70.95%), Query Frame = 0
Query:  229 GAGDALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPKSIRSKSSMA--GDKGTAEMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLD 553
            GAG AL  YL  ++ +DLLKP EE+ LGR IQ G+ +E  ++ L +     PS  EWA  +G++   L   + R+++AK+ M++ANLRL VS+AKRY+++ L   DL+QEG+FGL+KAAE+FDP++GFKFSTYATWWIKQSIMR IADQSR IRLPVHVHD LN +++ T E++ + G+ PTDE+L++ L+    +I++YR+AAR+ LSME   +   K S A  G K    +   +  P+   P+ +   +++K+ +++LL TLS REQE+V+ RFGL     RTLEE+G  F +TRERVRQIE+RAL KLRQPYRN+++R +  +
Sbjct:   54 GAG-ALSWYLSRMSAIDLLKPEEEVTLGRHIQLGLEWEAAKEELAVRLERQPSRAEWAAHMGVDEDTLKLIMIRSSRAKTTMISANLRLAVSIAKRYKHRGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLELGRTPTDEELSLRLQVPTQKIEFYREAARSVLSMEQSLNNARKGSAASLGGKSDMTLEDSLRDPE-PLPEDRTQQSMLKENMSQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAYAFE 378          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA)

HSP 1 Score: 300 bits (767), Expect = 6.670e-89
Identity = 151/315 (47.94%), Postives = 228/315 (72.38%), Query Frame = 0
Query:  237 YLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPK-SIRSKSSMAGDKGTAEMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDF 550
            + +++ +  LL+  EE++L R++Q  + +E+ RD L+   G  P+ EEWA ++GM+  EL R+L R   AK AM+++NLRLV+S+AKRY+ + L   DLIQEG+ GLV+A EKFDPE+GFKFSTY+TWWIKQ+I+R IADQSR IRLPVH+HD LN ++K T E+    G+ PT+E+LA  +   + ++++ ++ +R  +SM++ + ++  KSS AG  G  ++G  +   D   P +   + ++K+ I +L+ TLS REQ++++ RFGL  D P+TLEE+G+ F +TRERVRQIEARALHKLRQPYRN+++R++
Sbjct:  163 FFKSIGQHSLLRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQKRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHDLLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRPAVSMDAQRRAMTKKSSSAGKGGEVQLGDSIKD-DGPCPTQVTEANMLKEDIEKLVCTLSPREQDVIRMRFGLDADKPKTLEEIGNVFSVTRERVRQIEARALHKLRQPYRNHKLREY 476          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A7S2KJI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJI8_9STRA)

HSP 1 Score: 291 bits (746), Expect = 7.190e-87
Identity = 158/324 (48.77%), Postives = 223/324 (68.83%), Query Frame = 0
Query:  232 DALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPKSI---RSKSSMAGDKGTAEMGQGV----SGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVR 548
            +++  YL+T+   DLL+  EE++L R IQ  + +E  R+ L+      P+  EWA+A+ +++  L R++ R+ +AK+A++ +NLRLVVS+AKRY  + + FQDL QEGT GL +A EKFDPERGF+FSTYATWWIKQ IMR IADQSR IRLPVHVHD LN VR+VT E+++  G+ PTDE++A   + TV ++ + R A + T+S+E+P ++   +  SS  G  G  +   G     SGP    P   AS+ ++K  ++ +L TLS REQ +++ RFGL     +TLEE+G  F +TRER+RQIEARALHKLRQPYRN+ V+
Sbjct:   88 ESISHYLKTMGNHDLLRREEEVILARHIQILIKWEEVREELESKLIRPPTYAEWAVAVNLDVPGLKRQIRRSQRAKAALIESNLRLVVSIAKRYVNRGMNFQDLCQEGTLGLTRATEKFDPERGFRFSTYATWWIKQGIMRAIADQSREIRLPVHVHDQLNGVRRVTKELSELLGRDPTDEEIAEKAKITVQKLTFLRKAQQGTISIETPMNMGAGKGSSSGGGSMGQNDKTMGDLLRDSGP---APVDLASNEMLKDDVSRMLCTLSPREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIEARALHKLRQPYRNHSVK 408          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA)

HSP 1 Score: 289 bits (739), Expect = 8.800e-85
Identity = 159/326 (48.77%), Postives = 221/326 (67.79%), Query Frame = 0
Query:  232 DALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRY--RYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPKSIRSKSSMAGDKGTAEMGQGVSGPDKAT-----PDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDF 550
            D ++ YL+++   DLL   EE++L R +Q  + +E  R+ L++     P+  EWA A+G++  +L R++ R+ +AK+AM+ +NLRLV+S+AKRY  R  +L+ QDL QEG+ GLVKA EKFDPERGF+FSTYATWWIKQS+MR IADQSR IRLPVH+HD LN VRK   E+T K G+ PT E++A     TV ++Q+   ++R T+S E    +      AG          V   D  T     P++KA+ ++MK  I  LL TLSVREQ++++ RFGL     +TLEE+G  FR+TRER+RQIEARALHKLRQPYRN++++ +
Sbjct:  172 DTMKDYLKSMGNHDLLTAQEEVLLARHVQLLLKWEEVRERLEIELARPPTYAEWAAAVGVDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNTLSVQDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQSRTIRLPVHIHDQLNTVRKHKRELTGKLGRQPTTEEIAEAAGITVDKLQFLWKSSRETMSFEQEIRVGG----AGXXXXXXXXXTVILSDSITDKEHMPEEKAALSLMKDDIDRLLGTLSVREQDVIRMRFGLDDGKAKTLEEIGKRFRVTRERIRQIEARALHKLRQPYRNHQIKQY 493          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A7R9ZH78_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZH78_9STRA)

HSP 1 Score: 280 bits (716), Expect = 6.040e-82
Identity = 156/332 (46.99%), Postives = 225/332 (67.77%), Query Frame = 0
Query:  232 DALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWA--IALGMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSME----SPKSIRSKSSMAGDKGTA---------EMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVR 548
            D+++ Y++T+A  DLLK +EEI+L R+IQ  V++E  R+ L+      P+  EWA  I  GM + E+ R++ R+ +AKSA+  +NLRLV+S+AKRY+ + L FQDL QEGT GL +A EKFDPERGF+FSTYATWWIKQSIMR IADQ R IRLPVH+HD LN +RKV  +++++ G+ P++E++A  ++    ++++ +  ++ +LSME    S K+  S +   G KGT           +G  V  P +A  D  A   +++  +  L+ TL+ REQ +++ RFGL     +TLEE+G  F +TRER+RQIEARALHKLRQPYRN+ V+
Sbjct:  123 DSMKYYMKTMANHDLLKKNEEIILAREIQILVAWEKKREDLEANLMRPPTYAEWAEDIREGMTVPEMKRQIRRSLRAKSALTESNLRLVISIAKRYQNRGLNFQDLCQEGTLGLTRACEKFDPERGFRFSTYATWWIKQSIMRAIADQGRTIRLPVHIHDQLNVIRKVERDLSNELGREPSNEEVAGRVDLKPEKVEFLKKVSKHSLSMETQLNSSKTKGSGAGTGGSKGTGGASSSERQFTLGDTVKDPKQAPMDM-AEYGMLRDDMKRLICTLNSREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIEARALHKLRQPYRNHSVK 453          
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Match: A0A8J9SAA1_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SAA1_PHATR)

HSP 1 Score: 273 bits (697), Expect = 6.820e-81
Identity = 148/328 (45.12%), Postives = 221/328 (67.38%), Query Frame = 0
Query:  232 DALQQYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIAL--GMELGELSRELARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIEMTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSME----SPKSIRSKSSMAGDKGTAEMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVKARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDFKLD 553
            D+++ Y++T+   +LL  +EEI+LGR++Q  + YE TR+ L+      P+ +EWA  +   M + +L +++ R+ +AK+A+  +N+RLVVS+AKRY+++ L+FQDL QEG  GL +A EKFDPERGF+FSTYA+WWIKQSIMR IADQ R IRLPVH+HD +N +RKV  E+  + G+    E++      T  +I++    ++  +SME    + KS  S + + G  G   +G  V G  +A P ++AS  ++K  I+ L+ TL+ REQ +++ RFGL     +TLEE+G  F +TRER+RQIE+RALHKLRQPYRN+ V+ +  D
Sbjct:    1 DSIRSYIKTMCNHELLNKNEEIILGREVQVLIQYEATREQLEAELLRPPTYQEWATKIQPDMMVPDLKKQIRRSLRAKAALTESNIRLVVSIAKRYQHRGLSFQDLAQEGILGLTRACEKFDPERGFRFSTYASWWIKQSIMRAIADQGRTIRLPVHIHDQINALRKVERELKAELGRDARLEEITEKSTLTAEKIEFLNRVSQQDVSMEQELRTSKSKGSSAGLGGPDGGLTLGD-VMGDPEAQPAEEASYQMLKDDISRLICTLNSREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIESRALHKLRQPYRNHAVKCYVKD 327          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5192.13277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3H4_9PHAE2.350e-26259.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNI6_ECTSI1.400e-25368.99Chloroplast RNA-polymerase sigma factor n=1 Tax=Ec... [more]
A0A6H5KA31_9PHAE4.010e-9753.87RNA_pol_sigma70 domain-containing protein n=2 Tax=... [more]
A0A835ZBY3_9STRA1.340e-9652.74RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A835ZES3_9STRA3.950e-9450.15RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2WX55_9STRA6.670e-8947.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2KJI8_9STRA7.190e-8748.77Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1B782_9STRA8.800e-8548.77Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7R9ZH78_9STRA6.040e-8246.99Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J9SAA1_PHATR6.820e-8145.12Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 569..589
NoneNo IPR availableCOILSCoilCoilcoord: 675..702
NoneNo IPR availableGENE3D1.10.601.10coord: 283..382
e-value: 1.8E-43
score: 151.3
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGBcoord: 143..550
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 143..550
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..848
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.457
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 512..527
score: 58.35
coord: 527..538
score: 62.1
coord: 334..347
score: 62.44
coord: 491..503
score: 39.06
coord: 358..366
score: 89.82
IPR000943RNA polymerase sigma-70PROSITEPS00715SIGMA70_1coord: 334..347
IPR000943RNA polymerase sigma-70PROSITEPS00716SIGMA70_2coord: 512..538
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 311..379
e-value: 1.4E-19
score: 69.6
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 488..540
e-value: 3.6E-14
score: 52.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 383..454
e-value: 2.7E-11
score: 45.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 469..552
e-value: 1.3E-25
score: 91.0
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 391..444
e-value: 1.1E-5
score: 25.4
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 308..540
e-value: 1.6E-30
score: 103.9
IPR009042RNA polymerase sigma-70 region 1.2PFAMPF00140Sigma70_r1_2coord: 232..263
e-value: 1.3E-8
score: 34.7
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 453..549
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 381..439
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 232..380

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5192contigL-elsbetiae_contig5192:1513..9583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5192.13277.1mRNA_L-elsbetiae_contig5192.13277.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5192 1513..9887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5192.13277.1 ID=prot_L-elsbetiae_contig5192.13277.1|Name=mRNA_L-elsbetiae_contig5192.13277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=848bp
MASARRKLTVCVVGAMCASAPPAEGFTPPGCLARLCAAGDGFYAAERRLA
AASAAAGDRRGAPASRRVSTRGRGAAGGGRGGGAGALAASVAARGGLSPA
AAGSKRRGRQSASWWTQRPAAAAAAAATPVTSTTVMMMSAAVAEAEAPPA
AAAVEEEEEFEEDLAVDITPSPGRQPLPGMPMDMRDDSEFYIEMERKRAA
GPTYNRDRDMPGLGQVMRRTGKRGGRRSGAGDALQQYLRTVAKVDLLKPH
EEIVLGRQIQKGVSYENTRDHLQLMHGCVPSNEEWAIALGMELGELSREL
ARAAKAKSAMLAANLRLVVSVAKRYRYQSLTFQDLIQEGTFGLVKAAEKF
DPERGFKFSTYATWWIKQSIMRGIADQSRVIRLPVHVHDFLNRVRKVTIE
MTDKNGKLPTDEDLAIHLECTVVRIQYYRDAARATLSMESPKSIRSKSSM
AGDKGTAEMGQGVSGPDKATPDKKASSTVMKQKITELLMTLSVREQEIVK
ARFGLGGDLPRTLEEVGHDFRLTRERVRQIEARALHKLRQPYRNYRVRDF
KLDQMLVQAGVLGPPSATIEAAREAVSEAEAAAKRNEVALTHQRLGTTPG
GTGAAAAEMASELQLILGARAKEKEAARLLREGGGIGEGEEEDGGLPRHH
QPLLDVGLGGGSAASGGGEGVGVAGELLRQQQEQEQQQLAQKEEERREEE
NAFEFEDEFATALEEKFDDGFEDDFEDDIAAAVFGSDGSRGGGGGGAAAA
GQAGASMDAVRTLNKAWTNTASRSPRDAADQLAMMGASAAPRLPEDDEQQ
LLSTLDSFDILVDGDEEEEEEEGDGDGEGGRHESESAEPLDRLQSEMK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR007627RNA_pol_sigma70_r2
IPR007630RNA_pol_sigma70_r4
IPR036388WH-like_DNA-bd_sf
IPR007624RNA_pol_sigma70_r3
IPR014284RNA_pol_sigma-70_dom
IPR009042RNA_pol_sigma70_r1_2
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2