prot_L-elsbetiae_contig5189.13273.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5189.13273.1
Unique Name	prot_L-elsbetiae_contig5189.13273.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	151

Homology

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BLAST of mRNA_L-elsbetiae_contig5189.13273.1 vs. uniprot
Match: D8LTT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT2_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 4.740e-28
Identity = 80/152 (52.63%), Postives = 89/152 (58.55%), Query Frame = 0

Query:    1 LVGGSW-GAGGXXXXXXXXSFNYGDLTMEGRGSGGGGIGGPVRSASWAEKFVTKREEQSVLVRQLERELTSTVSALRDERREKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTTTLMXXXEALRTRCDRLSASREERAEEADKTVARLRE 151
             +G SW G GG         +  G L   G+G      G   RSASWAEK VTKREEQSVLV+QLEREL STVSAL+DERRE+R                             MTTTLM   EAL++RCDRL ASREERAEEADKT+ARLRE
Sbjct:  482 FLGSSWAGVGGSSG-----GYQLGGLAAAGKG------GDAFRSASWAEKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRATVGDREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTMARLRE 622

[Close]

BLAST of mRNA_L-elsbetiae_contig5189.13273.1 vs. uniprot
Match: A0A6H5KDC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC5_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 6.440e-28
Identity = 81/152 (53.29%), Postives = 91/152 (59.87%), Query Frame = 0

Query:    1 LVGGSW-GAGGXXXXXXXXSFNYGDLTMEGRGSGGGGIGGPVRSASWAEKFVTKREEQSVLVRQLERELTSTVSALRDERREKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTTTLMXXXEALRTRCDRLSASREERAEEADKTVARLRE 151
            L+G SW G GG          + G   + GR + G G GG   SASWA K VTKREEQSVLV+QLEREL STVSAL+DERRE+R                             MTTTLM   EAL++RCDRL ASREERAEEADKT+ARLRE
Sbjct:  473 LLGSSWAGVGG----------SSGSYHLGGRAAAGEG-GGAFSSASWAAKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRAAVGYREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTMARLRE 613

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5189.13273.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5189.13273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LTT2_ECTSI	4.740e-28	52.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KDC5_9PHAE	6.440e-28	53.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	COILS	Coil	Coil	coord: 61..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5189	contig	L-elsbetiae_contig5189:10952..12880 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5189.13273.1	mRNA_L-elsbetiae_contig5189.13273.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5189 10952..12880 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5189.13273.1 ID=prot_L-elsbetiae_contig5189.13273.1|Name=mRNA_L-elsbetiae_contig5189.13273.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
LVGGSWGAGGGSWGGSGSSFNYGDLTMEGRGSGGGGIGGPVRSASWAEKF
VTKREEQSVLVRQLERELTSTVSALRDERREKRGQAEALKSKLDKARGAA
RDLETELERRERMTTTLMGELEALRTRCDRLSASREERAEEADKTVARLR
E