prot_L-elsbetiae_contig515.13224.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig515.13224.1
Unique Nameprot_L-elsbetiae_contig515.13224.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length462
Homology
BLAST of mRNA_L-elsbetiae_contig515.13224.1 vs. uniprot
Match: D8LEI4_ECTSI (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI4_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 1.340e-119
Identity = 216/366 (59.02%), Postives = 251/366 (68.58%), Query Frame = 0
Query:  135 IVVVLQGVWDGTRDNGKDP----------HDPYRPALSCLAVLSIGILLHLVAPSLGGFLLRQLDDVRLARLLPSGDRRCARWGWKTAKECFATSVVFGLCITAAALSGGGPLLLGLGMTHSVVSASREALPVIRKGWLKRKMSRRKSTM------------AAPSSTHEFSLQGVITLIRSGPTQVVCSPVILPTFVLWMTHSTICSWPKECTDRLVFLLKVSATTVCTTHLMQPSLPKAGAPAQGNADDSS-------------GS----TAWVNKAFVCVCSSAAWTLLLLCCLIVLGHQESSEGILAMVLVVTIVALRTRHERTWRGLMLVFWVALLAILVNAACSKLMQQNKVFRRVFSDD 461
            +VV+LQGVWD   +N +             + YRP LSC AVLS+   +  VAP LG FLL QLDDVRL R   S DRRC RWGWKTAKEC ATS+VFGLCITAA +SGGG LLLGLGMTHSVVSA REA+PVIRKGWL+R+MSR                 AA  S    SL+GV+  IRSGPT+VVCSPV+LP FVLWMT+STICSWPKECT+RL FLL+V A TVCT HL +     A   A+ +   SS             GS    T W+++A VC C+ AAW  LLLCCL+V G +ESSEGIL  VLVVT VALR+  E++WRGLML FWVALLA+L+NAA  KL+QQNKVF RVFSD+
Sbjct:    1 MVVILQGVWDEGFENEEREGXXXXXXFPRKEFYRPCLSCFAVLSLAAAVQCVAPRLGEFLLCQLDDVRLLRR-GSVDRRCERWGWKTAKECLATSLVFGLCITAAVVSGGGALLLGLGMTHSVVSAGREAVPVIRKGWLRRRMSRGXXXXXXXXXXXXXXXPAAQGSG--LSLRGVLASIRSGPTRVVCSPVVLPAFVLWMTYSTICSWPKECTERLAFLLEVLAATVCTMHLARAPAAAAAVAAENDPRSSSTRHGNEAVLLVEGGSAVVATKWISRALVCACAVAAWAFLLLCCLVVFGRRESSEGILVAVLVVTAVALRSPREKSWRGLMLAFWVALLAVLLNAAALKLLQQNKVFHRVFSDE 363          
BLAST of mRNA_L-elsbetiae_contig515.13224.1 vs. uniprot
Match: A0A6H5JQP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP3_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 3.560e-115
Identity = 225/421 (53.44%), Postives = 268/421 (63.66%), Query Frame = 0
Query:   51 KPLWQRFLPLIVSSAVL---FCLFFYFAAERPNDDSVHFALMCFIGGVVAVEATESAIKMFGGVHPAAIAAVSHFRANASGYMASFVIVVVL--QGVWDGTRDNGKDPHDPYRPALSCLAVLSIGILLHLVAPSLGGFLLRQLDDVRLARLLPSGDRRCAR-WGWKTAKECFATSVVFGLCITAAALSGGGPLLLGLGMTHSVVSASREALPVIRKGWLKRKMSRRKSTMAAPSSTHEFSLQGVITLIRSGPTQVVCSPVILPTFVLWMTHSTICSWPKECTDRLVFLLKVSATTVCTTHLMQPSLPKAGAPAQGNADDSSGSTAWVNKAFVC---VCSSAAWTLLLLCCLIVLGHQESSEGILAMVLVVTIVALRTRHERTWRGLMLVFWVALLAILVNAACSKLMQQNKVFRRVFSDDV 462
            KPL QR LPL VS AVL   +CLF +F  E P++D V   L+C+IGGVV VEA ESAI+ F G+H A    V+HFRA+AS YMASFVI+V +  Q V+ G  D             S LAVL+ G L+H VAP LGG         R A+    G    +R W W+ AK+C   +V   L  TAA L  GG  LLGL +  +  +A +E    IR+GW        + T   PSST   SLQ V+T   SGPT+ V S V+LPT +LW+T+ T+CSWP+ECTD LVFLLK SATTVCTTHLMQ ++ +A A AQ N   SSGST W NKAFVC   VC  AAWTLLLLC   VLGHQES  GILA+V VVT+VA RTR ERTWRGLMLVF V LLAI+V  AC KL    +VF+RV S+DV
Sbjct:   42 KPLLQRLLPLAVSGAVLLGLYCLFSFFVVEWPHNDRVLLVLLCYIGGVVLVEAAESAIEWFKGLHTA----VAHFRASASTYMASFVIIVAVVPQDVYSGAGD-----------LRSSLAVLACGFLVHHVAPLLGGHQPEGGVSPRPAQSSDDGHSLPSRQWRWRAAKKCIPAAVGV-LLSTAATLVTGGGWLLGLEIAGAAWAAFQEMRLAIREGW--------RETRETPSSTQAISLQSVVTWFTSGPTRRVWSSVLLPTLLLWVTYRTVCSWPEECTDWLVFLLKASATTVCTTHLMQQTVREAVASAQDNG--SSGSTTWANKAFVCLRCVCCVAAWTLLLLCSFTVLGHQESFSGILAVVFVVTMVAFRTRCERTWRGLMLVFSVTLLAIMVRVACVKLFHIFEVFKRVTSNDV 436          
BLAST of mRNA_L-elsbetiae_contig515.13224.1 vs. uniprot
Match: D7FR82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR82_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 6.800e-112
Identity = 231/449 (51.45%), Postives = 271/449 (60.36%), Query Frame = 0
Query:   23 GKSRNLGAAKQNQXXXXXXXXXXXXXXXKPLWQRFLPLIVSSAVL---FCLFFYFAAERPNDDSVHFALMCFIGGVVAVEATESAIKMFGGVHPAAIAAVSHFRANASGYMASFVIVVVL--QGVWDGTRDNGKDPHDPYRPALSCLAVLSIGILLHLVAPSLGGFLLRQLDDVRLARLLPSGDRRCARWG-WKTAKECFATSVVFGLCITAAALSGGGPLLLGLGMTHSVVSASREALPVIRKGWLKRKMSRRKSTMAAPSSTHEFSLQGVITLIRSGPTQVVCSPVILPTFVLWMTHSTICSWPKECTDRLVFLLKVSATTVCTTHLMQPSLPKAGAPAQGNADDSSGSTAWVNKAFVC---VCSSAAWTLLLLCCLIVLGHQESSEGILAMVLVVTIVALRTRHERTWRGLMLVFWVALLAILVNAACSKLMQQNKVFRRVFSDDV 462
            GK   + AA+ NQ               KPL Q  LPL VS AVL   +CLF +F  E P+DD V   L+C+IGGVV VEA ESAIK FGGVHPA    V+HFRA+AS YMASFVIVVV+  QGVW    D             S LAVLS G L++ VAP LGG         R A+    G     R   WK  K+C  T+V   L  TAA    GG LLLGL +  +  +A +E    +R+G        R  T   P ST + SLQGV+T   SGP + V SPV+LPT +LW+T+ T+CSWP++CT+ LVFLLK SAT+VCTTHLMQ ++ +A   AQ N   SSGST W +KAF C   VC  AAWTLLLLC   VLGH ES  GILA+VLVVTIVA R R ERTWRGLMLVF V LLAI+V  AC KL    +VF RV S DV
Sbjct:   23 GKKAKVSAAQNNQRQQL-----------KPLLQWLLPLAVSGAVLLGLYCLFSFFVVEWPHDDRVLLVLLCYIGGVVLVEAAESAIKRFGGVHPA----VAHFRADASTYMASFVIVVVVVTQGVWSRIGD-----------LRSSLAVLSCGFLVYQVAPLLGGHQPEGGVSPRPAQGSDGGHSLPFRKRIWKAVKKCIPTAVGV-LLSTAATFVTGGGLLLGLEIAGAAWTAFQEMRLALREG--------RPETQETPCSTQDVSLQGVVTWFTSGPMRRVWSPVLLPTLLLWVTYRTVCSWPEDCTEWLVFLLKASATSVCTTHLMQQTVREAVTSAQDNG--SSGSTTWADKAFECLRCVCCVAAWTLLLLCSFTVLGHHESFVGILAVVLVVTIVAFRIRCERTWRGLMLVFSVTLLAIMVRVACVKLFHIFEVFNRVRSKDV 434          
BLAST of mRNA_L-elsbetiae_contig515.13224.1 vs. uniprot
Match: A0A6H5JXR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR1_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 3.910e-92
Identity = 176/334 (52.69%), Postives = 206/334 (61.68%), Query Frame = 0
Query:  157 YRPALSCLAVLSIGILLHLVAPSLGGFLLRQLDDVRLARLLPSGDRRCARWGWKTAKECFATSVVFGLCITAAALSGGGPLLLGLGMTHSVVSASREALPVIRKGWLKRKMSRRKSTMAAPSSTHE----------FSLQGVITLIRSGPTQVVCSPVILPTFVLWMTHSTICSWPKECTDRLVFLLKVSATTVCTTHLMQPSLPKAGAPAQG--------NADDSS-----------GSTAWVNKAFVCVCSSAAWTLLLLCCLIVLGHQESSEGILAMVLVVTIVALRTRHERTWRGLMLVFWVALLAILVNAACSKLMQQNKVFRRVFSDD 461
            YRP LSC  VLS+   +  VAP LG FLLRQLDDV L R   S D RC RWGWKTAKEC ATS VFGLCITAA +SGGG LLLGLGMTHSVVSA R+A+PVIRKGWL+R+MSR                        SL+GV+  I                       STI S PKECT+RL FLL+V A TVCT HL +     A   A+         + D+++            +T W ++A VC CS AAW  LL+CCL+V G +ESSEGIL  VLVVT VALR+  E +WRGLML FWVALLA+L+NAA  KL+QQN+VF RVFSD+
Sbjct:   38 YRPCLSCFGVLSLAAAVQHVAPRLGEFLLRQLDDVHLLRR-GSVDSRCERWGWKTAKECLATSAVFGLCITAAVVSGGGALLLGLGMTHSVVSAGRQAVPVIRKGWLRRRMSRXXXXXXXXXXXXXXXXPAAQGLGLSLRGVLASI-----------------------STIWSSPKECTERLAFLLEVLAATVCTMHLARAPAAAAAVAAENYPRSSPTRHGDEAALLVEGGKKCAVVATKWTSRALVCACSVAAWAPLLMCCLVVFGRRESSEGILVAVLVVTAVALRSSREMSWRGLMLAFWVALLAVLLNAAALKLLQQNRVFHRVFSDE 347          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig515.13224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEI4_ECTSI1.340e-11959.02Na_H_Exchanger domain-containing protein n=1 Tax=E... [more]
A0A6H5JQP3_9PHAE3.560e-11553.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR82_ECTSI6.800e-11251.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR1_9PHAE3.910e-9252.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 459..462
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 396..400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..258
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 418..428
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 374..395
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 449..462
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 401..417
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 259..373
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 429..448
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..236
NoneNo IPR availableTMHMMTMhelixcoord: 423..445
NoneNo IPR availableTMHMMTMhelixcoord: 220..242
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 84..101
NoneNo IPR availableTMHMMTMhelixcoord: 374..396
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 401..418

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig515contigL-elsbetiae_contig515:16678..20293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig515.13224.1mRNA_L-elsbetiae_contig515.13224.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig515 16678..20514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig515.13224.1 ID=prot_L-elsbetiae_contig515.13224.1|Name=mRNA_L-elsbetiae_contig515.13224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=462bp
MVASTLVERTNGKLPTPFTGKAGKSRNLGAAKQNQQQQEQQQQRRRQRPP
KPLWQRFLPLIVSSAVLFCLFFYFAAERPNDDSVHFALMCFIGGVVAVEA
TESAIKMFGGVHPAAIAAVSHFRANASGYMASFVIVVVLQGVWDGTRDNG
KDPHDPYRPALSCLAVLSIGILLHLVAPSLGGFLLRQLDDVRLARLLPSG
DRRCARWGWKTAKECFATSVVFGLCITAAALSGGGPLLLGLGMTHSVVSA
SREALPVIRKGWLKRKMSRRKSTMAAPSSTHEFSLQGVITLIRSGPTQVV
CSPVILPTFVLWMTHSTICSWPKECTDRLVFLLKVSATTVCTTHLMQPSL
PKAGAPAQGNADDSSGSTAWVNKAFVCVCSSAAWTLLLLCCLIVLGHQES
SEGILAMVLVVTIVALRTRHERTWRGLMLVFWVALLAILVNAACSKLMQQ
NKVFRRVFSDDV
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