prot_L-elsbetiae_contig5120.13187.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5120.13187.1
Unique Nameprot_L-elsbetiae_contig5120.13187.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length374
Homology
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 1.410e-135
Identity = 221/334 (66.17%), Postives = 247/334 (73.95%), Query Frame = 0
Query:    1 MRCQEEPSRRRARGTAD----RGSWRAGLSSWVAGATSFSRSSLYASVPAGIGIGAWWDGXXXXXXXXXN-----GTDAGVPAGDAMDGEGDSDEATGAY---VCSSXXXXXXXXXXXXXXXAFLAPKESRPFAPWVWLSAMWGLYAVWLRRSPLVTKALTSGALALGGDMAAQFFEFRQQAVSSRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHKAAPEEAV 322
            MRCQ E    RA   A     + SW  G+SSWVAGATSFSRS+++AS P G  +GAWW+G XXXXXXXX      GTD       AM   G+ D+A GA     CS+               +   PK+S  F PWVWLSAMWG+YA WLRRSPLV KA+TSG L L GDMAAQFFEF+Q+A S R+GPFLK+ RRL AVAIDSILITGPALHALYGLLECLIPT  GGFVPAA H++IDTFVFDPMFVASFFCVTG+LESR L++ +LPALRREFWPAV GSW+VS  FCPLQF TFRYLPLEFRVLSVN CDIAWTSV+SYFSHKA P E V
Sbjct:   49 MRCQGECGTTRAATAAANASRQASWGVGVSSWVAGATSFSRSAIHASTPEG--VGAWWNGSXXXXXXXXXXXXXXGTDGXXXXXGAM---GEGDDAKGASDMNACSTQHRDRGERASSTVDMSGGEPKKSASFGPWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNNRRLTAVAIDSILITGPALHALYGLLECLIPTVGGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRPLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHKAVPAEGV 377          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 3.720e-135
Identity = 218/307 (71.01%), Postives = 241/307 (78.50%), Query Frame = 0
Query:   20 SWRAGLSSWVAGATSFSRSSLYASVPAGIGIGAWWDGXXXXXXXXX-----NGTDAGVPAGDAMDGEGDSDE-ATGAYVCSSXXXXXXXXXXXXXXXAFLAPKESRPFAPWVWLSAMWGLYAVWLRRSPLVTKALTSGALALGGDMAAQFFEFRQQAVSSRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHKAAPEE 320
            SW  G+SSWVA AT FSRS+L+AS P G  IGAWW+GXXXXXXXXX     NGTD       AM GEGD  + A+    CS+               +  A K+S  F PWVWLSAMWG+YA WLRRSPLV KA+TSG L L GDMAAQFFEF+Q+A S R+GPFLK+TRRL AVAIDSILITGPALHALYGLLECLIPTAAGGFVPAA H++IDTFVFDPMFVASFFCVTG+LESRSL++ +LPALRREFWPAV GSW+VS  FCPLQF TFRYLPLEFRVLSVN CDIAWTSV+SYFSHKA P E
Sbjct:   72 SWGVGVSSWVAEATYFSRSALHASTPEG--IGAWWNGXXXXXXXXXXXXXXNGTDGXXXXXXAM-GEGDDGKRASDMNACSTQHRDRGEGASPTVEMSGGASKKSARFGPWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNTRRLTAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRSLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHKAVPTE 375          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A7S3XMM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMM5_HETAK)

HSP 1 Score: 184 bits (466), Expect = 5.220e-53
Identity = 93/191 (48.69%), Postives = 126/191 (65.97%), Query Frame = 0
Query:  133 LYAVWLRRSPLVTKALTSGALALGGDMAAQFFEFRQQAVSSRKG----PFLKDTRRLLAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHKAAPE 319
            LY+  L+ +P++TKAL++  +A  GD A Q +E  ++  +S +G     F+ D RR LAV +D I ITGP LH  Y LLE L+PT  GG +PA  H+  DTF+ DP+FV +FF  TG+ E R L  D LP LRREF  A+ GSW VS    P+QF +FRY+P+ +RVL VN  D+AWT+ +S+FSHK + E
Sbjct:   23 LYSSMLKNAPMLTKALSAAGIAASGDFATQIWEHWRE--TSNQGILVDKFILDRRRQLAVMMDGIFITGPILHLAYELLEHLVPTEGGGALPAVLHVAADTFLLDPLFVCTFFLTTGLFERRPLWADTLPRLRREFPAALRGSWSVSAVCLPVQFASFRYVPVRYRVLLVNCIDLAWTATMSFFSHKESAE 211          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: W7TTT3_9STRA (Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTT3_9STRA)

HSP 1 Score: 183 bits (464), Expect = 5.550e-51
Identity = 88/191 (46.07%), Postives = 126/191 (65.97%), Query Frame = 0
Query:  129 AMWGLYAVWLRRSPLVTKALTSGALALGGDMAAQFFEF----RQQAVSSRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHK 315
            ++WG YA  L   P++TKA+T+G +AL GD+ AQ FE+    R+ A      PF  +  R LAV I+ ++ITGP LH LY  LE  +P A  GF+ A +H+ +D F+FDP+FV  FF + G++E + L +D+ P ++RE+W A+ G W VS  F PL+F TFR LPL  RVL VN+ D+ WT+V+S+F H+
Sbjct:  154 SLWGQYAELLESKPVLTKAITAGLIALFGDLLAQVFEYKLTCRRLAKGEEPAPFHLNFLRCLAVTIEGVVITGPGLHYLYTALESWMP-AQRGFLAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKHLSRDIFPQVQREYWSALKGGWGVSIMFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHR 343          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A836CPL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL7_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.970e-50
Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 0
Query:  196 TGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHKAAPEE 320
            TGP LH LYGLLE  IPT AGG +PAA H+L+DTF+FDP+FV +FF  T + E +S+K++V+P L RE+WPAV GSW VS  F PLQ+  FRYLPL+ RVLS+NVCD+AWT+VLS+FSHK  P+E
Sbjct:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK--PDE 123          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A836CK90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK90_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.740e-50
Identity = 78/128 (60.94%), Postives = 99/128 (77.34%), Query Frame = 0
Query:  190 IDSILITGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHKAA 317
            ID + ITGP LH LYGLLE  IPT AGG +PAA+H+L+DTF+FDP+FV SFF  T + E RSL++DV P L RE+WPA+ GSW VS  F P+Q+  FRYLPL+ RV S+N+CD+AWT+ LSY SH+ +
Sbjct:    2 IDGVCITGPGLHFLYGLLESHIPTTAGGALPAAAHVLLDTFLFDPVFVCSFFFTTALFEGRSLRRDVAPRLAREYWPALRGSWGVSVLFWPVQWAAFRYLPLQLRVASINLCDVAWTAALSYASHRGS 129          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A6U1B1H0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B1H0_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.730e-37
Identity = 75/183 (40.98%), Postives = 112/183 (61.20%), Query Frame = 0
Query:  132 GLYAVWLRRSPLVTKALTSGALALGGDMAAQFFEFRQQAVSSRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSH 314
            G Y   L  +P+ TKA+++G +   GDM AQ  E R+  +     PF  D  R  A  +D +L+TGP+LH  Y LLE +IP+  G        + +D  +FDP+ +A+FFC T ++E    ++D++  LR ++W    G + VSF   P+QFI+FRY+P++ RVL VN+CD+AWTSV+S  SH
Sbjct:   69 GWYLALLSSAPIRTKAVSTGCIECLGDMIAQTAEARRTGL-----PF--DRVRSFACFVDGLLVTGPSLHYGYALLERVIPSVGGPVWATLIQITVDELIFDPIDIATFFCTTSLIE----RKDLVQRLRNDYWSTFWGGFGVSFACTPIQFISFRYMPVKTRVLVVNLCDLAWTSVVSVLSH 240          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A7S2M641_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M641_9STRA)

HSP 1 Score: 133 bits (335), Expect = 6.760e-33
Identity = 77/205 (37.56%), Postives = 111/205 (54.15%), Query Frame = 0
Query:  128 SAMWGLYAVWLRRSPLVTKALTSGALALGGDMAAQFFEFR--QQAVSSRKGPFLK-----------DTRRLLAVAIDSILITGPALHALYGLLECLIPTAAGGF-----VPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSH 314
            SA +  Y   L  +PL+TK +T G +A  GD  AQFFE++  Q    S  G   K           + RR +A  ++ +LI+ P +H  Y L E ++PT  GG      + A +H+L D  + D +FV +    TG+LE    +Q V+P LRR + P +  S +      PLQF++FR+LPL  RVLSVN  D+ WT V+S+ SH
Sbjct:   72 SAFFAWYLSALDATPLLTKCVTGGLIAFVGDYGAQFFEWKSKQAPKESYNGSTTKQRSTISIHGTYNIRRGIARFLECLLISSPLMHYGYDLFETVVPTVGGGSALYRSIAALTHVLADCVLLDAIFVMTGIVFTGLLEGHRFRQQVIPNLRRVYLPTLKASVMTCGLLAPLQFLSFRFLPLSLRVLSVNAVDLIWTGVISFVSH 276          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A1Z5JHC7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHC7_FISSO)

HSP 1 Score: 127 bits (320), Expect = 1.340e-30
Identity = 72/195 (36.92%), Postives = 109/195 (55.90%), Query Frame = 0
Query:  127 LSAMWGLYAVWLRRSPLVTKALTSGALALGGDMAAQFFEFRQQAVSSRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLECLIPTAAG-GFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHKAAPEE 320
            L A+   Y +WL   PL+TK++TS  +   GD  AQ +E      S R+G         LA  ++ +L +GP +H  Y L E ++P     GF  A  H+L+D+ + D +FV S F +TG+LE  S KQ +    +R+    +  SW+ S    P++ + FRYLP+ +RVL+VNV DI W +V+S+ SHK   +E
Sbjct:   83 LGALLQTYTLWLTTQPLLTKSITSAVMGCVGDAVAQRWE-HHPIYSKRRG---------LAAMVEGLLWSGPLMHRAYSLFEHILPVGNNMGF--ALIHVLLDSLLLDSVFVTSAFWITGLLEGFSFKQ-LRQQYQRDIGGTLKASWLTSLFLLPVEVVCFRYLPVTYRVLAVNVLDIVWDTVISFMSHKTRGKE 264          
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Match: A0A7S3LFT8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFT8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.520e-29
Identity = 77/221 (34.84%), Postives = 116/221 (52.49%), Query Frame = 0
Query:  124 WVWLSAMWGL--------------YAVWLRRSPLVTKALTSGALALGGDMAAQFFE-FRQQAVSSRKGPFLK-DTRRLLAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESRSLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNVCDIAWTSVLSYFSHKAAPEEAVRADDKH 328
            WVW SA   L              Y + L  +PLVTK +T+G +   GD  AQ  E F  Q  ++      K D RR L+  +    I+GP +H  Y L + ++P    G   A  H+L D+   D +FVA+ + VTG +E    +Q V+P LR+++ P +  SW  S    P++F+ FR+LPL +RVL+VN  D+ W  V+S+ +H++      R D+KH
Sbjct:  155 WVWQSAAPNLLPLISQGLHASMAWYMMQLSVNPLVTKGITAGVIGSLGDFLAQSLENFLHQRKNNAPVVHSKYDPRRGLSTLLYGFFISGPLMHFAYDLFDRVLPIHGNG--AALVHVLADSIFLDAIFVAATYIVTGRMEGYKFRQ-VMPQLRKDYLPTLKASWATSIFLMPVEFVCFRFLPLNYRVLAVNFIDLIWDGVISFMAHRS------RQDNKH 366          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5120.13187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRI6_ECTSI1.410e-13566.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK43_9PHAE3.720e-13571.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMM5_HETAK5.220e-5348.69Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TTT3_9STRA5.550e-5146.07Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A836CPL7_9STRA1.970e-5064.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CK90_9STRA5.740e-5060.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1B1H0_9STRA1.730e-3740.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2M641_9STRA6.760e-3337.56Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5JHC7_FISSO1.340e-3036.92Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S3LFT8_9STRA3.520e-2934.84Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 245..310
e-value: 6.5E-16
score: 58.3
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 99..327
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 99..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..267
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 205..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 290..373
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..289
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..137
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 264..286
NoneNo IPR availableTMHMMTMhelixcoord: 184..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5120contigL-elsbetiae_contig5120:8878..11363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5120.13187.1mRNA_L-elsbetiae_contig5120.13187.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5120 8763..11399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5120.13187.1 ID=prot_L-elsbetiae_contig5120.13187.1|Name=mRNA_L-elsbetiae_contig5120.13187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=374bp
MRCQEEPSRRRARGTADRGSWRAGLSSWVAGATSFSRSSLYASVPAGIGI
GAWWDGGGSAGGGGNNGTDAGVPAGDAMDGEGDSDEATGAYVCSSSSSSS
SSGSSSAAAAAFLAPKESRPFAPWVWLSAMWGLYAVWLRRSPLVTKALTS
GALALGGDMAAQFFEFRQQAVSSRKGPFLKDTRRLLAVAIDSILITGPAL
HALYGLLECLIPTAAGGFVPAASHLLIDTFVFDPMFVASFFCVTGILESR
SLKQDVLPALRREFWPAVHGSWVVSFCFCPLQFITFRYLPLEFRVLSVNV
CDIAWTSVLSYFSHKAAPEEAVRADDKHTSSGVRVERKGTNRAGGGLLNR
GGPSGGFAKGSGRDSNRLVGARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22